| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0487 |
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| Symbol | |
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| ID | 8418293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 592657 |
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| End bp | 593508 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645037049 |
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| Product | HflC protein |
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| Protein accession | YP_003197362 |
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| Protein GI | 258404620 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.426626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGC GTACTGGAAT AGCTGTGGCG GTGGTGCTCG TCCTCTTGCT CGTGGGCATA
GGACAGAGCT TTTACACCGT GGATGAGACG CAGCGTGGAG TTATCCTGCA GTTAGGAAAA
CCGGTTGGAG AAACCGTGGG TCCGGGACTG CATTTCAAGC TGCCTTTTGT ACAAAATGTG
TTGTTGTTTG ATCACCGGAT TCAGGACTAT GATGCCAATC CGGCCGAGAT TTTGACCGAA
GATAAAAAGA ATCTGGTTGT CGACAATTAT TCGCGTTGGC GTATCGAAGA CCCGCTCAAA
TTTTACCGTA CCGTACGAAC CGTCAGTCAG GGTGTGTCCC GGATTGACGA TATCGTGTAC
TCCGAATTGC GGGTTGAGTT GGGACAATAC ACGCTCAATG AAGTGGTCTC CTCGAAACGT
GGGGATATCA TGACCGCTGT GCGGGACAAA GCGGATGCCC TGCTTGACGA ATACGGCATC
AAGATCTTTG ACGTGCGCAT CAAACGCACC GATTTGCCCG AGGAGAACCA GATGGCCATT
TTCGGGCGCA TGCGCTCCGA GCGGGAGCGT GAGGCCAAAC GGTACCGTTC GGAAGGGCAC
GAAGAGGCTT CGAAAATCCG AGCCGTGGCT GATAAGGATC GGACGATCAT GCTTGCTGAG
GCCGAACGCA AGGCCCAGAT CCTGCGCGGT GAAGGTGACG CGGAAGCGGC ACGTATTTTT
GCCGAAGCCC TGGGCCAGGA TAAGGAATTC TTTTCCTTTG TCCGGAGTCT GGAGGCTTAT
GAAAAAGGGC TCTCCAACAG CACCCGGTTG ATCATGGACA ATCAGAACGA GTTCTTGCGC
TATCTGCAAT AA
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| Protein sequence | MPKRTGIAVA VVLVLLLVGI GQSFYTVDET QRGVILQLGK PVGETVGPGL HFKLPFVQNV
LLFDHRIQDY DANPAEILTE DKKNLVVDNY SRWRIEDPLK FYRTVRTVSQ GVSRIDDIVY
SELRVELGQY TLNEVVSSKR GDIMTAVRDK ADALLDEYGI KIFDVRIKRT DLPEENQMAI
FGRMRSERER EAKRYRSEGH EEASKIRAVA DKDRTIMLAE AERKAQILRG EGDAEAARIF
AEALGQDKEF FSFVRSLEAY EKGLSNSTRL IMDNQNEFLR YLQ
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