Gene Dret_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0479 
Symbol 
ID8418285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp584261 
End bp584812 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID645037041 
ProductACT domain-containing protein 
Protein accessionYP_003197354 
Protein GI258404612 
COG category[T] Signal transduction mechanisms 
COG ID[COG3830] ACT domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.219232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA GTATTATCAG TGTGGTGGGG CAGGACCGAC CAGGAATAGT GGCTGATGTT 
GCGGCCATAC TCGCTGAATT GGAATGCAAT ATTGAGGATG TCTCCCAGAC GATCCTCCAG
GGGCAATTTG CGGCCCTGTT TATTGCCAGT ATTCCAGGAG CGCAGTCCGT CAACGAGGTC
CGCACCAGCC TCGAAGACCG TTTGGCTCCT CAGGGCCTGA ACTGTGTCGT TCGCGAATTC
GAGGAAAGCG CTGCGCCTTC GCCTCGGGAG GCTGCGTCGT TCGTGATCAT CACCATCGGG
CCCGATGCCC CGGGCCTGAT CGCCGCCATG GCCGGGGTGC TCAAAACCCA TGCGGTCAAT
ATCTGTAATC TTCAGGCGGT CAATCGGTCT CAGGCCTATC CGGATCAGAT GGTCATGATT
TACGAAGTCA CCGTGCCTGA AGACACCTCG CTGCCGGCGT TGCGGACCGC TTTGCAGCAG
CGCGCCGCCC GTGACGGACT GGAGGTCAGC GTCCAGCACA AGGCGATCTT CGAAGAGATT
CACCGGCTAT AA
 
Protein sequence
MHKSIISVVG QDRPGIVADV AAILAELECN IEDVSQTILQ GQFAALFIAS IPGAQSVNEV 
RTSLEDRLAP QGLNCVVREF EESAAPSPRE AASFVIITIG PDAPGLIAAM AGVLKTHAVN
ICNLQAVNRS QAYPDQMVMI YEVTVPEDTS LPALRTALQQ RAARDGLEVS VQHKAIFEEI
HRL