Gene Dret_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0462 
Symbol 
ID8418268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp566840 
End bp567379 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content61% 
IMG OID645037024 
ProductAMMECR1 domain protein 
Protein accessionYP_003197337 
Protein GI258404595 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTTGG CTTTGAATGA GCAGGAACGA CGCGCCCTGA AAGATCTGGC CGAGCGGAGC 
ATCCGCAGCC GTTTTGATCC CCAGCAGCAC TTGCCGGAAG CGCCGAGCGA ACAAATGCAG
GAAAATTTGG GCGCCTTTGT GACCCTCAAG CAGGCGGGGC ATCTGCGCGG CTGCATTGGA
CATGTTATCG GAGACCGGCC CTTGTGGCAG ACCATTGCGG ATATGGCCCA GGCCGCTGCC
TTTGACGACC CCCGTTTCCC TTCGCTGCAG GAAGGTGAAA TCAAAGACCT GGAGATCGAG
ATTTCCGTGC TGGGTCCCTT GGAGCCGGTG ACCGATCCGG AGGGGGTTGA GCCGGGACGC
CATGGCCTGC TGGTGCAACG TTCGGTCCAT TCGGGGCTGT TGCTGCCCCA GGTGGCCACA
GAGCAGGGGT GGGACCGGGA GACCTTTTTG GGGCAGACCT GCGTGAAAGC CGGGTTGCCT
CCCACGGCCT GGAAAAGCAA GAAGACCCAG GTCTACCGTT TTGAAGCCGA GGTTTTTTAG
 
Protein sequence
MQLALNEQER RALKDLAERS IRSRFDPQQH LPEAPSEQMQ ENLGAFVTLK QAGHLRGCIG 
HVIGDRPLWQ TIADMAQAAA FDDPRFPSLQ EGEIKDLEIE ISVLGPLEPV TDPEGVEPGR
HGLLVQRSVH SGLLLPQVAT EQGWDRETFL GQTCVKAGLP PTAWKSKKTQ VYRFEAEVF