| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0433 |
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| Symbol | |
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| ID | 8418238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 535472 |
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| End bp | 537259 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036994 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003197308 |
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| Protein GI | 258404566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.933362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCGCA AATTCTCTCC CGGCCCGCTC GGGCTCCTCA TCCTTTTGTT TTGTCTCTCT
TTCTGGCCCC AGACGGCCGG GGCGGAACAA TTGCGGTACA CAATTTCCTG GCACGGTCTT
GAAGATACTG AATTGGAACA GACGTTGCGA GCCGTCTCGA ACACAGCACA ATATATCGAG
ACCCCACCAG CCTCCCTCGG ACTGCTCCGA CAGCGTATCA AGGAGGATAT CCCCCGCTTG
CAACAGGTAT TGCAGGCCCG GGGCCACTTC AAGGCTCAGA TCTCGCATCA GATCGACCTG
CAGGCCTCGC CCATCGAAAT CCGCTTCCGG GTCATTCCTG GGCCCCAATT CGCTTTGGAA
AAAATCGTCT TTCGGTCCGA ACGGCCATTG CCGAAACAGG TGGGCTTTCC CACCCCCGAA
CAACTCAGGC TCTCCCCCGG CTCGGGCATC ACCACCGAGG CCCTCGTGCG GGGACGCCGC
TTGGCCGAAT CCTATTTTCG CGACCGCGGC TGGCCTTTTG CCGAAGTCCA GAAGCCAGAG
GCCACGGCTG ATCACGCCAC CGCCACGGTC AGTGTCGTCT ATCCCGTCTC TCCCGGCCCC
CGCCTGCGTT TCGGTCCCCT GCGGCTGGAA GGGCTCAACC GGGTCAATCC GGTCCATGTC
CGGCGACAAG TGGCCTGGGA AAACGGGGCC TGGTATAACG CCACCCAAGT CGATGCGACC
GAGCGGGCCC TCCTGCAAAG CGGTCTGTTC ACCACGGCCG CGATCCGGCG CGGTGAAGCC
GGAGAAGGCG ACATGGCCCT GCCGCTTTCT CTCCAACTCC GAGAACGCAA GCCGCGCACG
GTCAAAGCCG GGGTGGAATA CACCTCCGAC TTCGCCTTTG GAGCCCAACT CAGTTGGGAA
CACCGCAACC TTTTCGGGCG TGGGGAACGG TTGCAGACAC AAGCCAAATA CAACGCTGCG
CAGAAAACTC TTGAATCCTC CCTGCGCTTC CCCTCCTTTC TGGACCCCGC GCAGGAACTC
GTCCTGTCCA GCGATCTGAC CGAAGAGGAT ACCGACGCCT ACACCAGCCG CCACCTGCGC
AACAGTGTCC GCCTCGAGCG GCAATTGACC ACCTCCTTGC GAGGCGGACT CGGGATTGGA
CACGAATACC TCGAACAGGA AGAAGATGAT GCCACGGACA TTTTCAACCT GATCTCCGTG
CCCCTGTTTC TGGATTGGGA CCAACGCAAC GATATCCTCA ATCCGACCCA CGGCTACCGG
CTGCAAATCC ATGCCACGCC CTACCAGGAT ATCGCTGATG AAACCGGCAA TTTTTTTAAA
TACAAGGCCA CCGGTTCCCT GTATATTCCT CTCATGGCTG GACCACGCCT GGTCTGGGCC
GGGCAGGCTG GCTTCGGACA AATCCTCGGG CGCACCGGCG CGGTTCCGAC CAGCAAACGG
TTCTTTCCCG GCGGCGGGGG GTCCATTCGG GGTTTCCGGT ACCAAAGCGC CGGGCCGTTG
GCCTCCGACG ACACCCCGCT TGGCGGGCGC AGTGTCCTGG AACTCTCTTC GGAATTCCGG
ATCGCCCTGA GCGACAAGTG GGGAGGCACC GTTTTTGTCG ATACCGGGCG GGCCTATTCT
GGCATCGAAC CCGAAACCCG GGAGGAGCTG TTCTGGGGGG CAGGTATCGG CCTGCGCTAC
TATTCCGGAA TCGGTCCCCT GCGGCTGGAT GTCGCCACCC CGCTCAACCC CCGGGAGGGC
ACGGACGATC CGCTGCAATT CTATTTCAGC ATCGGCCAGG CCTTTTAA
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| Protein sequence | MQRKFSPGPL GLLILLFCLS FWPQTAGAEQ LRYTISWHGL EDTELEQTLR AVSNTAQYIE
TPPASLGLLR QRIKEDIPRL QQVLQARGHF KAQISHQIDL QASPIEIRFR VIPGPQFALE
KIVFRSERPL PKQVGFPTPE QLRLSPGSGI TTEALVRGRR LAESYFRDRG WPFAEVQKPE
ATADHATATV SVVYPVSPGP RLRFGPLRLE GLNRVNPVHV RRQVAWENGA WYNATQVDAT
ERALLQSGLF TTAAIRRGEA GEGDMALPLS LQLRERKPRT VKAGVEYTSD FAFGAQLSWE
HRNLFGRGER LQTQAKYNAA QKTLESSLRF PSFLDPAQEL VLSSDLTEED TDAYTSRHLR
NSVRLERQLT TSLRGGLGIG HEYLEQEEDD ATDIFNLISV PLFLDWDQRN DILNPTHGYR
LQIHATPYQD IADETGNFFK YKATGSLYIP LMAGPRLVWA GQAGFGQILG RTGAVPTSKR
FFPGGGGSIR GFRYQSAGPL ASDDTPLGGR SVLELSSEFR IALSDKWGGT VFVDTGRAYS
GIEPETREEL FWGAGIGLRY YSGIGPLRLD VATPLNPREG TDDPLQFYFS IGQAF
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