| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0422 |
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| Symbol | |
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| ID | 8418227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 517549 |
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| End bp | 518616 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036983 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
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| Protein accession | YP_003197297 |
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| Protein GI | 258404555 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.664623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCT TTTTCGACTT GCTCAGAGAC ATCATCCACC CTGGATATTG CCGCCGTTGC
GGCGGGTGTG TCGCGTTTTG CCAGGCCAAC AATTACGGGG CCTTGGAAAC AAGTCCCGAG
GGGTGGCCGC AATTTCGCAA CGCGGAACGG TGCCTGGAAT GCGGCGTCTG TTATCAGATC
TGCCCGGCCA CGGGACAGTT GACCGCAGAA ACCCGCCGTC GCGTGGCCTG GTCAGCTCCC
ATCGGCCGGG TCATGGACAG TGGCGTATTT CGCAGCACTG CCTCCTCCGC TGCCACGCAC
CCCGACGGCA AAGTCGGACT GGGGCTTATC GAACATCTGT TTGCCACCGA CCGGATTGAC
GGCGCCGTGG TTTTGCCCAC GGACCATGTC TTCAACAAAG CCTCCCAACT GGCCAGGACC
CCGGACCAGC TCCGGGCCCT GGACGACAAA GGCCTGACCA CGTCCCAGGT CCGGGCGGCG
GCCTCGTCAC TCGAGGTTTT GGGGTCAGTG CGCAAAACCG GGCTGCGCCG GGTCGCCTTC
ATGGGCACCC CCTGCCAGGT GGAAACAGTG CGCAAAATGG AAATCCTGGC CGTGCCTCCT
GCCGAGCGGC TCTATTGCAC CATCGGGTGC TTTTGCGACG GCGACTTTCT GCTCGGTCCC
GCCCAGCAGG ACCGCTTGGA AAAACTCGGC TTCTTCCGCT GGAACGATGT GCGCCATATC
ACGTTGCGCG ACCATCTGGA ATTCTGGCTC GCCGAGGGCA AAACCCGGGA CATCCCCATG
GAAGACCTGG ATTTCATGCG CCGCTACGCC TGCCGCTTGT GTACTGACTA TTCCGCACAA
TTTGCGGACC TCGCCGTCGG CGGCACGGGG GCCCCGCATG GATGGAGTAC GGTCATCGCC
CGAACGCCCC TGGGCCAGGC CATTCTCAGT GAAGCCAGGC AGACCGCATT GGAACCATTC
AACGGGACCG CAGCTTCCCA GACCCGGCAC AACGCCTTGT ACACCGTCTG CCGGCTGGCG
GAGCGAAAAC AGCACCGGGC CCTGCACAGC AGCAGGGCGG CAATGTGA
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| Protein sequence | MASFFDLLRD IIHPGYCRRC GGCVAFCQAN NYGALETSPE GWPQFRNAER CLECGVCYQI
CPATGQLTAE TRRRVAWSAP IGRVMDSGVF RSTASSAATH PDGKVGLGLI EHLFATDRID
GAVVLPTDHV FNKASQLART PDQLRALDDK GLTTSQVRAA ASSLEVLGSV RKTGLRRVAF
MGTPCQVETV RKMEILAVPP AERLYCTIGC FCDGDFLLGP AQQDRLEKLG FFRWNDVRHI
TLRDHLEFWL AEGKTRDIPM EDLDFMRRYA CRLCTDYSAQ FADLAVGGTG APHGWSTVIA
RTPLGQAILS EARQTALEPF NGTAASQTRH NALYTVCRLA ERKQHRALHS SRAAM
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