Gene Dret_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0403 
Symbol 
ID8418208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp493422 
End bp493877 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID645036965 
Productnuclease (SNase domain protein) 
Protein accessionYP_003197279 
Protein GI258404537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.356281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGAC ATAGAATCCG GATTCTCTTT CTCTTGCTGG TGCTCATCGG TTCCACCGGA 
AGTGCCTGGG CTTGGCCGGG ACGGGTGCTA GAGATCGCCT CTTCGCAGGT GCTGGTGATC
AAGACGGAGC AGGAGGTCAA GCGGGTGAGT CTGTTCGGTG TGGACAGCGT GCCCAAGGGC
CACCCGCACC AAGCCCAGGT CCAACGGTGT ATCAAAAACG AATTGGCCCC GCTCAACCGG
GTCGAGGTCG TGCCGGTACA GGGGCACCAG GCCCATGTCT ATATTGAAGG CGACGGCCAG
AATCTGGCCG AAGAACTCAT CCGCGCCGGC TACGCCTGGG TCGACCGCGC GGACTGCGGC
ACACGGATCT GCCGCTTCTG GCGCTCCCTG GAAGCCCAGG CCCGGCAGGA ACACCGCGGC
CTGTGGGCTG AACCGTCATT CCCGGTTGGC AAATGA
 
Protein sequence
MTRHRIRILF LLLVLIGSTG SAWAWPGRVL EIASSQVLVI KTEQEVKRVS LFGVDSVPKG 
HPHQAQVQRC IKNELAPLNR VEVVPVQGHQ AHVYIEGDGQ NLAEELIRAG YAWVDRADCG
TRICRFWRSL EAQARQEHRG LWAEPSFPVG K