Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0403 |
Symbol | |
ID | 8418208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 493422 |
End bp | 493877 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645036965 |
Product | nuclease (SNase domain protein) |
Protein accession | YP_003197279 |
Protein GI | 258404537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.356281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAGAC ATAGAATCCG GATTCTCTTT CTCTTGCTGG TGCTCATCGG TTCCACCGGA AGTGCCTGGG CTTGGCCGGG ACGGGTGCTA GAGATCGCCT CTTCGCAGGT GCTGGTGATC AAGACGGAGC AGGAGGTCAA GCGGGTGAGT CTGTTCGGTG TGGACAGCGT GCCCAAGGGC CACCCGCACC AAGCCCAGGT CCAACGGTGT ATCAAAAACG AATTGGCCCC GCTCAACCGG GTCGAGGTCG TGCCGGTACA GGGGCACCAG GCCCATGTCT ATATTGAAGG CGACGGCCAG AATCTGGCCG AAGAACTCAT CCGCGCCGGC TACGCCTGGG TCGACCGCGC GGACTGCGGC ACACGGATCT GCCGCTTCTG GCGCTCCCTG GAAGCCCAGG CCCGGCAGGA ACACCGCGGC CTGTGGGCTG AACCGTCATT CCCGGTTGGC AAATGA
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Protein sequence | MTRHRIRILF LLLVLIGSTG SAWAWPGRVL EIASSQVLVI KTEQEVKRVS LFGVDSVPKG HPHQAQVQRC IKNELAPLNR VEVVPVQGHQ AHVYIEGDGQ NLAEELIRAG YAWVDRADCG TRICRFWRSL EAQARQEHRG LWAEPSFPVG K
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