| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0388 |
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| Symbol | |
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| ID | 8418193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 475996 |
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| End bp | 478161 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645036952 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_003197266 |
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| Protein GI | 258404524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.702394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.542029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA TTCTCCAAGA CCTGCAAAAT GGAAAAACCG AATTGGTTGA GGTCCCCAAA
CCTAGGACGA AATCTGGGCA TTTGTATATC CAAAGCTCTA CTTCCCTTAT CTCCGCCGGC
ACCGAGCGGA TGCTCATTGA CTTCGGCAAG GGCAATTACC TGCAAAAGGC CCGGCAACAG
CCGGAGAAAG TGAAAGAGGT TTTAGACAAG GTGCGCACCG ACGGGCTGAT GCCGACTGTG
GAAGCTGTAC GGTCCAAGCT GGGAGCGCCT TTGCCGCTGG GGTATTGCAA CGTTGGCCGG
GTTGAAGACC CGGCCACGAG TTTTAAGGGG CAAGTTTTAA GTTTTAAGAA AAATGATCGT
GTGGCGAGTA ATGGGCCGCA TGCGGAATAT GTGTGTGTGC CGAAGAACCT GTGTGCCAAA
GTTCCGGACA ACGTATCTGA TGAAGAGGCC GCCTTTACGG TGATCGGGGC CATTGCCCTG
CAGGGCGTGC GTTTGGCTGA GCCCACTCTG GGGGAATATT TTGTGGTCAC CGGGTTGGGG
CTCGTGGGGC TGATGACGGT CCAGATTCTG TCGGCCAACG GTTGTTCAGT ATTGGGAATT
GATTTTGACC CGGACAAGTG CCGCTTGGCG GAGCGATTCG GGGCCAAGGC TGTCTGTCTG
GGCCAGGGTG AAGATCCGTT GCGGGTTGCG GACGGTTTTT CCAAAGGGCG GGGGGTGGAC
GGCGTAATTA TTTGCGCGGC CACCAAGTCC AATGATCCCA TCCGCCAGGC CACGGAGATG
TGCCGCAGAA AAGGCCGGAT CGTGCTCACC GGAGTGACCG GGCTGGAGCT GTCCCGGGAT
CTGTTTTTCA AAAAAGAGCT TTCCTTCCAG GTTTCCTGTT CCTATGGCCC GGGGCGATAC
GATCCGGAGT ATGAGGACAA GGGCAAGGAT TATCCATTCG AATTCGTGCG CTGGACTGAG
CAGCGCAATT TCGAGGCCGT GCTGGATTTG ATGGCCGCCG GAAAGCTGGA TGTAAAGCCG
CTAATAAGTC ATAGATTCGT TTTTGAAAAT GCTGAAGATG CGTACAGGAT GATTGCGGAT
AATTCTGAGC CGTATGTGGG AATTATTCTG GATTATCAGA GCTCGGAGGG CGGAGGGCGG
AAGACAGAGG GCGGAGGGTG GACAGTTCAG TTGCGTTCTT CGCAGACGTC TGATCTCCGG
TCTCCGACCT CCGCTGTTGT TGGCATGATC GGGGCTGGCG GATACACCGG GCAGGTGCTC
CTTCCGGCAA TGGGCAAGGG CAGCGATGTC CGGTTTAAAA CCATCGCTTC GGGCACCGGG
GTTTCCGGTA CCCATCTGGG CAAAAAGTTC GGATTCGAGC AATCGACCAC GGACACGGAA
GCGCTGCTCA GCGACCCGGA AATCAACACC GTTTTTGTGA CCACTAGGCA CAATACCCAT
TACCGCTTCG TCATGCAGGC GCTGGAGGCG GGGAAGCATG TGTTTGTGGA AAAACCGCTG
TGTATGAATA GAGAGGAACT GGATGATATT TCCAATGCCT ATGCTGATCG AGGGTCTTTG
ACGTCGAACC ACCGGCCACC GATCCTAATG CTCGGCTTCA ATAGGCGCTT TGCGCCCCTG
ATTCAGCAGA TGCAGCAGGC ACTGGGTGCC ATGTCCGGGC CGAAGTCTAT GATCATGACC
GTGAACGCCG GGGAGATCCC CCTGGAGCAC TGGACGCAGG ATCCGCAGGT CGGCGGGGGA
CGTATCATCG GCGAAGCCTG CCATTTCATT GATCTTTTGC GCTATTTGGC CGGGGCGCAT
ATCACGGGCT ATGACAAGAC CGTGATGCAA AGCGCTGGCG GGGACACCCT GACCATCACG
CTGCGCTTCG CGGATGGCTC CATCGGCGCA GTGCACTATT TCGCCAACGG GTCCAAGATG
TTTCCCAAGG AGCGGCTGGA AGTCTTCTGT GAGGGCAAGA TCCTGCAGAT GAACAATTTC
CGCACATTGA AGGGCTATGG CTTTCCTCGC AAGGGTAGGG GGGGCAATAA ACGGCTCTGG
CGGCAGGACA AGGGCCAGCA AGCAGAAATG CAGGCGTTTT TCGCGGCGAT CCGCGAGGGC
CAAGCAAGCC CGATCCCCTT TGAAGAGATC ACTGAGGTCA TGCGGGTGAC GCTGGCTCTG
GCCTAA
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| Protein sequence | MKQILQDLQN GKTELVEVPK PRTKSGHLYI QSSTSLISAG TERMLIDFGK GNYLQKARQQ
PEKVKEVLDK VRTDGLMPTV EAVRSKLGAP LPLGYCNVGR VEDPATSFKG QVLSFKKNDR
VASNGPHAEY VCVPKNLCAK VPDNVSDEEA AFTVIGAIAL QGVRLAEPTL GEYFVVTGLG
LVGLMTVQIL SANGCSVLGI DFDPDKCRLA ERFGAKAVCL GQGEDPLRVA DGFSKGRGVD
GVIICAATKS NDPIRQATEM CRRKGRIVLT GVTGLELSRD LFFKKELSFQ VSCSYGPGRY
DPEYEDKGKD YPFEFVRWTE QRNFEAVLDL MAAGKLDVKP LISHRFVFEN AEDAYRMIAD
NSEPYVGIIL DYQSSEGGGR KTEGGGWTVQ LRSSQTSDLR SPTSAVVGMI GAGGYTGQVL
LPAMGKGSDV RFKTIASGTG VSGTHLGKKF GFEQSTTDTE ALLSDPEINT VFVTTRHNTH
YRFVMQALEA GKHVFVEKPL CMNREELDDI SNAYADRGSL TSNHRPPILM LGFNRRFAPL
IQQMQQALGA MSGPKSMIMT VNAGEIPLEH WTQDPQVGGG RIIGEACHFI DLLRYLAGAH
ITGYDKTVMQ SAGGDTLTIT LRFADGSIGA VHYFANGSKM FPKERLEVFC EGKILQMNNF
RTLKGYGFPR KGRGGNKRLW RQDKGQQAEM QAFFAAIREG QASPIPFEEI TEVMRVTLAL
A
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