| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0382 |
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| Symbol | |
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| ID | 8418187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 468530 |
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| End bp | 469933 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645036947 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003197261 |
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| Protein GI | 258404519 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.399639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG CCAAGTCTGC TATTCAGGGT GGTCTATGGA TGGCCGGGAT AAGGTATATT
GCCTTTATAA TCAATTTTGT GGGCAACATC TGGCTAGCCA GACTTTTGGT TCCAGAGGAT
TTTGGTATCT TTGCCCTGGC CATGTCCATT TCCGAAATCC TTTTCATGAT CGGAGGATTC
GGCCTGGCCA AAGCGTGCAT ACAATTGCAG GACCAGCCAA AGGTTTTTGA TACCGGGCTC
GTTTTCGCTT GGGCGCTTAC AGCCCTTCTA TCTGTCATTG GTCTTATATC AGCTTGGGTG
GCCACAAATG TATACGCACA CGATGTGGCT ATCTTTTTGG TTGTATTATG TTTAATAAAA
TCCTTGCAGT TCCCAGGCTC TGTCTATTTG GCCTACTTGG AAAAGGATTT TGCCTTTCGC
AAAAGTGCTT TCATCTCCGG CTTTGGCCGC AGCATTGCCA TTTGTCTGGC CATAGCACTG
GCCATTTGGG GTCTTGGTAA ATGGAGCCTG CTGCTGCGGG AAGTAATGGC TATAGGTTTC
GTCTTTCTGG GATCCCTTAT TTTTTCTCCC TTTAGGTTCG GCTTTTCTTT TGATAAAAAT
ACAGCAAAAA AGATTTGGCG TTTTTCCTTT GGCATGTTTT TTATGCGCAT GAGCGAGGTG
CTCTTTAACC GGGCACCAAA TTTGGTGCTG GGCAGCTTGG CCGGTCCAGC CACGCTTGGT
CTGTTTGAGC GCAGCCTTTA TGTCTCTAAC TTGCCAAATA CCATGCTCTC CCAGTTCTAT
GGCAAGGTGG GGTTTGCGGT CTTTTCCAAA GTCAAGAACC AACCGGAGAA GATTGCTAAG
GGGCTGGAGT GGAACCTTTT TTTTGCTAGC AGGATAATGT TTTTGGCCGG GCTACTGGTA
TTTCTTTTCC CTGAACTTGT TTTGACCACT CTCCTGGGCC AGCAATGGGC AGAAGCTGCT
CCTTTCTTTC AAGGGTTTAC TCCTTTCATA GTTACACTTC CCATATTTGC TATTCTCAAG
CACGGCTTGT TGGCCATTGG TGCTACTAGA CCGGTCACAG TTAGTAGGAT TGTGGGTGTG
TTTATAGTAG GTGTCGGAAC TTTGATGGCC TGGTTTAGTG ATAGTCAATG GGTTGTAGTG
CCTTGGTTTA TGAGTTGGGC GTCGTTAATT GGTATAATTC TATTGGCTAT TGCATGCTAT
AAACACAAAA TGATGATTAA TCTGTTCAGA GTAATAAAAT TCCCTTTTTT TATAGCTATG
TTGTTTATAT TTGCTGTTAT GATTACACCC TGTGTAAAAC CAAGTTTGAA ATTTATATGC
ATCACAATAT TAGCATGGGC CATAATATTT ATTTTCTTGG ATAAAAATAA ATTGTCTATC
TTTTATAATA TATGTAAAAG ATAG
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| Protein sequence | MSLAKSAIQG GLWMAGIRYI AFIINFVGNI WLARLLVPED FGIFALAMSI SEILFMIGGF
GLAKACIQLQ DQPKVFDTGL VFAWALTALL SVIGLISAWV ATNVYAHDVA IFLVVLCLIK
SLQFPGSVYL AYLEKDFAFR KSAFISGFGR SIAICLAIAL AIWGLGKWSL LLREVMAIGF
VFLGSLIFSP FRFGFSFDKN TAKKIWRFSF GMFFMRMSEV LFNRAPNLVL GSLAGPATLG
LFERSLYVSN LPNTMLSQFY GKVGFAVFSK VKNQPEKIAK GLEWNLFFAS RIMFLAGLLV
FLFPELVLTT LLGQQWAEAA PFFQGFTPFI VTLPIFAILK HGLLAIGATR PVTVSRIVGV
FIVGVGTLMA WFSDSQWVVV PWFMSWASLI GIILLAIACY KHKMMINLFR VIKFPFFIAM
LFIFAVMITP CVKPSLKFIC ITILAWAIIF IFLDKNKLSI FYNICKR
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