| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0378 |
|---|
| Symbol | |
|---|
| ID | 8418183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 464315 |
|---|
| End bp | 465361 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 645036943 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003197257 |
|---|
| Protein GI | 258404515 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4641] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0536154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TGGTTATAGG TGATTTGCGA AAAGAGATAG CTCGATCATT CCAGCGCTAT
AATGCATTGA AAGAACTTGG GCATGATGTC ACTGGTTTAT CTTTTTTTAT AAGCCATAAC
AAATACAATA ATATAAATCA TAAGTTGTTA TATCGGATAT TTCATAAGTT GGGTTTTCCT
CTCGATAATA CAAAAATTAA CTATAGAATA TCAGATCACA TAAAAAAACA TCACTTCGAT
CTGATCTGGA TTGAAAAGGG ATTAATGGTC AAGCCTTCCG TGCTCAGAAA AGCAAAAACA
ATTCATCCTT ATTTAAAATT GCTGTCTTAT ACGGAAGACG ATATGTTTGC CAGGCATAAT
CAGTCCTGGT ATTACAAAAA GTGCCTTCCT CTGTATGATA TTGTTATCAC CACCAAGAGT
TACAACTGCA ATTCTGAAGA GCTTCCAGCG TTGGGTGCTA GAAAGGTTTT TTTTGTCGAT
AAAGCCTATG ACAAATACCG TCACCGTCCT ATCGAATTGA CGCAGCAAGA TATCCAAAAA
TTTGGTGCGG ATGTCGGCTT CATTGGAACT TACGAAAAAG ATCGAGCTGA AAAAATGCTT
TACTTGGCAC ATAATGGCAT TAAGGTTCGT ATTTGGGGAA ATGGGTGGGG AGATTGGGTT
GGCAAGCATC CCAATCTCCA GGTGGAAAAT AAACCAGTCT ACGGAGATGA TTATGTTAAA
GCCATATGCG CGACAAAGAT AAATTTGTGT TTTCTGCGTA AGATAAATAG AGACTTGCAG
ACTGATAGAA CTATGGAAAT ACCTGCATGC GGCGCTTTTA TGCTCGCTGA AAGAACCGAG
GAGCATTCAA GGCTGTTTGA GGAAAACTTT GAAGCATCTT TTTTTGATGT AAATGATCCA
GAAGAGCTTT TTGAAAAAGT TAGTTATTAT TTGCAACATG ATGATGAAAG GCAACAGATT
GCGAAAGCTG GCAGGCAAAG GTGTATTGAA AGCAAGTATA GTCATCATGA TCGACTGCAG
TATATCTTAA GCAAAATAAT AGGTTAA
|
|---|
| Protein sequence | MKILVIGDLR KEIARSFQRY NALKELGHDV TGLSFFISHN KYNNINHKLL YRIFHKLGFP
LDNTKINYRI SDHIKKHHFD LIWIEKGLMV KPSVLRKAKT IHPYLKLLSY TEDDMFARHN
QSWYYKKCLP LYDIVITTKS YNCNSEELPA LGARKVFFVD KAYDKYRHRP IELTQQDIQK
FGADVGFIGT YEKDRAEKML YLAHNGIKVR IWGNGWGDWV GKHPNLQVEN KPVYGDDYVK
AICATKINLC FLRKINRDLQ TDRTMEIPAC GAFMLAERTE EHSRLFEENF EASFFDVNDP
EELFEKVSYY LQHDDERQQI AKAGRQRCIE SKYSHHDRLQ YILSKIIG
|
|---|
| |