Gene Dret_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0338 
Symbol 
ID8418142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp420623 
End bp421369 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID645036903 
Productprotein of unknown function DUF364 
Protein accessionYP_003197218 
Protein GI258404476 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.296814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG ACCAGAACCT CTATGACATC TTTCAGGACA AGGCCCGACA GACCACCATC 
ACGACCCTCA ATCTCGGGCT GGCCTACACG GCTGTGGTGA CCTCAGACGG TGGGATCGGG
GTGGCCCACA CCTGCCTGGA GCAAAGCGGA CCGTGCGGCC TGGCCCATGA AAACCGGATC
TACGAAGGCC ACTGCGCCGC AGACCTGTTG CCCTGCATTC TGGAGGCTGA TCCCCTTAAA
CGCAGCATGG CGCTGGCTCT GATTAACGCC CTCAACCATT CAGCGGCGGT GGCGCTCCCT
GAAGACACGA CCACTCGCCT GTTCGAGCAC CTGAAAATCG GTCACGGAAC CCGGGTCGCC
ATGGTCGGCT ATTTCGGACC GCTCATGCCT GTTTTCCAAG AAAAGGGCGC GGTGGTGGAA
GCCATCGATC GAGGCCGGGC CATCGGCGAC CCCGCGGCCT TCCAGGCCAA ATTGCATGAC
TGGGCCGATG TCCTGCTTTT GACCTCGACC TCCATTCTCA ATCAGAGCAC CGAAGAAATC
CTGGGCCACA CATCGGACAC GGTCCGAACA GTGATTTTAG GACCAAGCAC TCCAATGGTC
CCCGACGCTT TTGCTTCCTT GCCAGTCAAC CTCCTGGCTG GAACGGTTCC CCTGGACAGT
AAGGGAGTCC TGCAATGCAT CCGTCACGGC GCAGGGACCC GGTCCATCCA CAAATTCAGC
CGCAAGGCCT TTACAGAGCT TGGCTGA
 
Protein sequence
MQLDQNLYDI FQDKARQTTI TTLNLGLAYT AVVTSDGGIG VAHTCLEQSG PCGLAHENRI 
YEGHCAADLL PCILEADPLK RSMALALINA LNHSAAVALP EDTTTRLFEH LKIGHGTRVA
MVGYFGPLMP VFQEKGAVVE AIDRGRAIGD PAAFQAKLHD WADVLLLTST SILNQSTEEI
LGHTSDTVRT VILGPSTPMV PDAFASLPVN LLAGTVPLDS KGVLQCIRHG AGTRSIHKFS
RKAFTELG