| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0327 |
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| Symbol | |
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| ID | 8418131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 408030 |
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| End bp | 410000 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036892 |
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| Product | peptidase U32 |
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| Protein accession | YP_003197207 |
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| Protein GI | 258404465 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA TATCCGCCTT CAAGCCCGAA ATTCTGGCCC CGGCCGGCAA CAAGGAAAGC
TTCCTGGCCG CTGTCGATGC CGGAGCAGAC GCCATATATT GCGGCCTGAA ACATTTTTCC
GCCCGCATGG AAGCCGACAA TTTTGCTCTG CGCGACCTGA GCCGCCTGCA GGGCCTGGCT
CAGAAACACG GCACCCGAAC CTACGTCGCC CTGAACACCC TTATCAAACC CAATGAGTTG
GACCAGGCCG GACGGCTTCT GGACCAATTG ACCCGCTACG TGCACCCCGA CGCGCTCATC
GTCCAGGACC CGGCCGCCCT CAAGCTAGCC CGACAGGCCG GCTTCACCGG CGAACTGCAC
TTCTCAACCC TGGCCAATAT CGGGCTCGCT TCAGCCCTGC CCAGTGTTTT GGCCCTGGGC
GCAGACCGCG TTGTTTTGCC CCGGGAATTG ACCGTCGACG AAATCAAAAC CTTGGACACT
GCCTGTCCCG ACGCCCTCGA TCTGGAAGTC TTTGTCCACG GTGCCCTGTG TTACGCGGTC
TCGGGCCGGT GCTACTGGTC GAGTTATCTG GGCGGGAAAA GCGGTCTGCG CGGGCGGTGC
GTCCAACCCT GCCGAAGGAT CTATACCGCT GGCGGACCGC CCCAGCGGCT TTTCTCCTGC
CAGGACTTGG GTCTGGACAT ATTGACCAAG GCCCTTTTGG AGGCCCCGCG GGTCAAAGCC
TGGAAAATAG AGGGGCGTAA GAAGGGCCCC CATTATGTGA CCTATACGGT CCGGGCCTAT
GCCCTGCTCC GGGACAACCC CCTGGATCCG CAGGCCAAGA AGGAAGCGGT CGACCTTCTG
GACCAGGCCT TGTCGCGGCC GACCACCCAC TACAGTTTTC TGCCCCAGCG CCCCCACCCT
CCGGTCACCC CGGACCAATC GACAGCCTCG GGAGGATATC TCGGCCGCTT GCAGGCCAAG
AACACCAAAA TCCAGCTCCG TCCTCACAAA GCGCTCTTGC CCCAAGACCT GCTTCGGATC
GGATATGAGG ACGAACCGGG ACACCGGATT TACAAGGTCA GCAAATACAT CCCCAAAGGG
GGGCTGTTGA CTATCCAAGG ACGCAACACA GAGAAACAAA AAGGGATGAG CGTCTTTTTG
ATCGACCGGC GCGAACCCGA ACTGGTGCAG CGCCTGAAGA AAATGGATCA GGAATTTCAG
GCCGAGCCCG CTCCTGAAAT CACCCCTTCC TCCTTCACCC CGACGCTGCC CGGAACCCGG
ACTCAGGCTG GCCGACCCAG CCTGGTCCGC GTCTATCGTA ACCTGCCGCC CGGCAAGACC
GGCAAGACGC CAGGACTGTG GGTCCAACCC AAACCGCCGC GGGGGATCAG CTCCACACGC
TACAGCCATA TCTGGTGGTG GCTGCCTCCA GTGCTCTGGC CCGAAGAGGA GCGACTGTGG
CAAGAGACGA TCGACCGTTT GCTGGCCCGC GGCGCGAAGC GCTTTGTTTT GAACGCCCCC
TGGCAGGTCG GATTCTTTAA CGATTCCGAG GATCTGATGC TCTGGGCCGG ACCGTTTTGC
AACCTGGCCA ATGCCCTGGC CCTGGAAAGC ATGGTCGAAC TCGGATTCAG CGGGGCTTTC
GCCAGCCCTG AACTCGCCGG ACCAGATCTC CTTGCCCTGC CCGGGCAGAG TCCGCTCCCA
ATGGGCTTGG TCCTCGGCGG AGCGTGGCCG TTTTGTCTCT CCCGGGTGCA GCCCCCCCAT
CTGGAGCCCG GCCAACGCGT GACCAGTCCG AAAAAAGAGA TATCCTGGAC CAAACGGTAT
GGGCCGACGA CTTGGCATTA CCCCAATTGG GACCTGGACC TCTACAAACA CCAGCGCGAG
TTGGAGCAGG CCGGATACAC CCTTTTTGCC CATCTCTATG AGCCGCGCCC CAAATCCGCG
CCCCGGCCCC ACCGGACCTC AACCTTCAAT TGGGATCTGC AACTCTTGTA G
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| Protein sequence | MPDISAFKPE ILAPAGNKES FLAAVDAGAD AIYCGLKHFS ARMEADNFAL RDLSRLQGLA
QKHGTRTYVA LNTLIKPNEL DQAGRLLDQL TRYVHPDALI VQDPAALKLA RQAGFTGELH
FSTLANIGLA SALPSVLALG ADRVVLPREL TVDEIKTLDT ACPDALDLEV FVHGALCYAV
SGRCYWSSYL GGKSGLRGRC VQPCRRIYTA GGPPQRLFSC QDLGLDILTK ALLEAPRVKA
WKIEGRKKGP HYVTYTVRAY ALLRDNPLDP QAKKEAVDLL DQALSRPTTH YSFLPQRPHP
PVTPDQSTAS GGYLGRLQAK NTKIQLRPHK ALLPQDLLRI GYEDEPGHRI YKVSKYIPKG
GLLTIQGRNT EKQKGMSVFL IDRREPELVQ RLKKMDQEFQ AEPAPEITPS SFTPTLPGTR
TQAGRPSLVR VYRNLPPGKT GKTPGLWVQP KPPRGISSTR YSHIWWWLPP VLWPEEERLW
QETIDRLLAR GAKRFVLNAP WQVGFFNDSE DLMLWAGPFC NLANALALES MVELGFSGAF
ASPELAGPDL LALPGQSPLP MGLVLGGAWP FCLSRVQPPH LEPGQRVTSP KKEISWTKRY
GPTTWHYPNW DLDLYKHQRE LEQAGYTLFA HLYEPRPKSA PRPHRTSTFN WDLQLL
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