Gene Dret_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0290 
Symbol 
ID8418094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp359338 
End bp360306 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content60% 
IMG OID645036855 
Productpolysaccharide deacetylase 
Protein accessionYP_003197170 
Protein GI258404428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAA CGTGGCGCTC CATCCCCATT CTCTGCTACC ACAACACGTG CGGCCCGGAT 
GGACACGACC AGGCGCAGTT GGCCGCCCAT CTCGATTGTA TCCGGGACAT GGGATTCGCC
ACGCTCACCA CGCGCGAGAT CGTGGACATC GTCACTGGCA CCACCCGGCT GAAGCGCCCG
GCTGTGGGCA TCACCTTTGA CGACGGTCAT GTCAGCAACT GGCTTTATGC CCTCCCGCTC
CTTCAACAGC GAGGAATGCG GGCCTCGTTT TTCGTCTGCA GCGATTTTAG CAGCGATGGC
CCGGCACGCC GCACTGAAGA GATACCGCAC CTTCTCGGAG GCGCCCAGAG CTTCTATCAA
GCTACGGTCC TGGGCGATAC GAGCCAATTC TGCACAACCA CAGAACTCTA TCATCTGGCG
CACACCCACG GCATGGATGT CCTACCCCAT TCAGCCCGCC ACGCCTTTTG TTTCCATGAG
ACGGCTCCCC GGCCCCAAGC CCGAGAAATC CACTGGGGGG CACACCTTGT CTACGGGCGG
GACGTCACGT ATGAAGACCT TCCCTGCCCC AAAGGCGGGA GCGCTTATGC GCATAGCGGC
TGGTGGCCGC AAGAAACGCA AAAGGGTATC CGGTGGACGA GCCGCAGCGA GCAGGAACGC
TACCGCTTCT GCCGTGAGGA TTTCACCCGC TGCAAGACGC GCTTGGAAGC GATCCTTAAA
CAACCGCTGG ACATCTTTTG TTGGCCGTGG GGAGAATACG ATCAGGTGGC GGAAAGGGCT
TTGAAAGACA CCGGATTCCA GGCCGCCCTG ACCCTTGAGC GAGGTCGAGT CGAACGGGGA
ACGAACCCCA TGCGTATCGG AAGACTCTCG GTTTCGCCGC GCAAATCCCT GTCCTGGCTT
AAGAGCCGAC TGAGGCTCAT GCGCTTCGCC CCAAGCGCCG GACTGACGTA TAAAAACGGT
TCGCTGTAA
 
Protein sequence
MPITWRSIPI LCYHNTCGPD GHDQAQLAAH LDCIRDMGFA TLTTREIVDI VTGTTRLKRP 
AVGITFDDGH VSNWLYALPL LQQRGMRASF FVCSDFSSDG PARRTEEIPH LLGGAQSFYQ
ATVLGDTSQF CTTTELYHLA HTHGMDVLPH SARHAFCFHE TAPRPQAREI HWGAHLVYGR
DVTYEDLPCP KGGSAYAHSG WWPQETQKGI RWTSRSEQER YRFCREDFTR CKTRLEAILK
QPLDIFCWPW GEYDQVAERA LKDTGFQAAL TLERGRVERG TNPMRIGRLS VSPRKSLSWL
KSRLRLMRFA PSAGLTYKNG SL