| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0260 |
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| Symbol | |
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| ID | 8418064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 322105 |
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| End bp | 323952 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036825 |
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| Product | Carboxylyase-related protein |
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| Protein accession | YP_003197140 |
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| Protein GI | 258404398 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTATA CCAATCTGCA CGACTGCGTG CACGATCTTG AAGCCGCCGG GCAACTCAGG
CGCATCGACA CAGAAATCGA TCCGCGCCTG GAGATGGGAG TCATCCAGCG CCGCGCCTTT
CAGGCTGGAG GCCCAGCTCT GCTGTTCACC CGGGTCAAAG GCAGCGGTTT TCCCATGCTC
GGCAATCTCT TCGGGACCCT GTCCAGAACC CGTTTCCTTT TTCGCGACAC CCTCAAGCGC
GTCGAGACCC TGGTCCAACT CAAGGTCGAT CCCGCCGAAA CGCTTCGCCG GCCATGGCGG
CTCGGCTCCC TGCCCCGCGC CCTGTGGCAC ACGCGCCCCA TGCTGCGCCG CAGCGGCCCG
GTGCTGGCGA ACACAACAAC AATTTCCAAT CTGCCCCAGC TTGTCTCCTG GCCGGAAGAC
GGCGGTGGAT ATGTCACCCT GCCTCAGGTC CTGAGCCGCT CGCCCCGCCG CGCTGACTGG
CAACACACCA ATCTCGGCAT GTACCGGGTC CAGCTCAGCG GCAACCATTT CGTCCCCGAC
ACCGAAGTCG GGCTGCATTA CCAGATCCAC CGGGGAATCG GGCCGCACCA CACCGAGGCC
CTGGAAAAAG GAGAATCCCT GCCGGTGAAT ATTTTTGTCG GCGGGCCTCC AGCCATGACG
CTGGCCGCGG TCATGCCGCT GCCCGAGAAT CTCCCGGAAC TCTTTTTCGC CGGCCTGCTC
GGAGGCCACC GCCCCACGCT GGTCCAAAGC GAACACCATC CCTTGCCTTT GCTCGCTGAG
GCCGATTTCT GCATATGTGG TCATGTCCCG CCGGGGGCCC TGAAACCCGA AGGGCCGTTC
GGAGACCACC TCGGGTACTA CAGCCTGACC CACGACTTTC CCGTGCTCAA GGTCGATGCG
GTCTACCATC GCAACGGGGC CATCTGGCCC TTTACCACGG TCGGGCGCCC GCCACAGGAA
GACACGGTTT TCGGGACGTT TATCCACGAA CTCACCGAAC CTCTGGTAGG GAGCGTTTTT
CAGGGTGTTC ACGAGGTCCA CGCGGTGGAT GCCGCTGGCG TCCATCCCTT ATTGCTGGCC
ATCGGGAGCG AGCGCTATGT CCCCTTCGCC AGCGAGCGCC AGCCCCAGGA ACTTTTGACC
AACGCTCTGT CTTTATTAGG GTCGACCCAG ACCTCATTGT CGAAATATCT TTTCATCGGG
GCCCGCGAAG ACGACTCCCG GCTCAGCACC AAGGATATTC CAGCCTTTTT CCGGCATATC
CTTGGCCGAG TCGACTGGCG GCGCGATCTG CACCTCATCA CCCGAACAAC AATGGATACC
CTCGACTACT CCGGGATCAG TCTCAATCAG GGGTCCAAAG GGATCATCGC CGCAGCGGGC
CCGGACACCA ACCGCCTGGA CAGCGAACTC CCGACTGACG TCTCTTTGCC CGAGGGATTC
AGCGCCCCCC GCTGCTTTGC CCCGGGCATC GCCGTATTGT CCGCCCCCCG GCACACCTTG
CCCAGGGACA CGCAAGATCC GGCACTTGAC CAGCTCTGCC GCCATCTGGA AGAAAGTCCT
GCCGACTGGA GCGGCTTCCA ACTTGTGGTT GTTGTTGATG CCAGCGAGGA GGCGGCGAAC
TCATGGGACG ATTTCCTGTG GCAGACGTTT ACCCGCTCCG ATCCGGCGAC CGACAGCTAC
GGTCTCGGGG CCTTTGTCCA ATCCAAGCAT TGGGGATGCA CCGGGGCGCT GGTCATCGAC
GCCCGGCTCA AATCCTACCA CGCCCCGCCC TTGGAGCCTG ACCCGGAGGT GGAAAAGCGT
GTTGACGAGT TGGCGGCGCC TGGAGGTCCG TTGCACGGGC TGTTCTAA
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| Protein sequence | MGYTNLHDCV HDLEAAGQLR RIDTEIDPRL EMGVIQRRAF QAGGPALLFT RVKGSGFPML
GNLFGTLSRT RFLFRDTLKR VETLVQLKVD PAETLRRPWR LGSLPRALWH TRPMLRRSGP
VLANTTTISN LPQLVSWPED GGGYVTLPQV LSRSPRRADW QHTNLGMYRV QLSGNHFVPD
TEVGLHYQIH RGIGPHHTEA LEKGESLPVN IFVGGPPAMT LAAVMPLPEN LPELFFAGLL
GGHRPTLVQS EHHPLPLLAE ADFCICGHVP PGALKPEGPF GDHLGYYSLT HDFPVLKVDA
VYHRNGAIWP FTTVGRPPQE DTVFGTFIHE LTEPLVGSVF QGVHEVHAVD AAGVHPLLLA
IGSERYVPFA SERQPQELLT NALSLLGSTQ TSLSKYLFIG AREDDSRLST KDIPAFFRHI
LGRVDWRRDL HLITRTTMDT LDYSGISLNQ GSKGIIAAAG PDTNRLDSEL PTDVSLPEGF
SAPRCFAPGI AVLSAPRHTL PRDTQDPALD QLCRHLEESP ADWSGFQLVV VVDASEEAAN
SWDDFLWQTF TRSDPATDSY GLGAFVQSKH WGCTGALVID ARLKSYHAPP LEPDPEVEKR
VDELAAPGGP LHGLF
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