Gene Dret_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0239 
Symbol 
ID8418043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp300874 
End bp302034 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content55% 
IMG OID645036804 
ProductPolysulphide reductase NrfD 
Protein accessionYP_003197119 
Protein GI258404377 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA AAGCGCTTTA TGGAGATAAA CGGTATTGGT CATGGGTGAT TTTTCTCCTG 
GCCCTGATCG GGATCGGCAG CACCTTCTAT TTCATGCAGC TGTCCCAGGG GTTAAAGGTC
ACCGGAATGA ACCGGGATGT GTCCTGGGGA TTTTACATCG CCCAATTCAC CTATCTGGTC
GGGGTTGCCG CTTCGGCGGT CATGCTGGTT TTGCCGTACT ACCTGCACGG CTACAAAAAA
TTCAAAAACA TGATTATCCT CGGTGAATTT TTGGCCATTG CCGCGGTGAT CATGTGTCTG
GGCTTTATCG TGGTTGACCT CGGCCAGCCC CAGCGGCTGA TGAACGTGAT CCTGCACCCC
ACGCCGAATT CGATCCTGTT CTGGGATATG ATCGTCTTGA ACGGCTATCT CATCCTGAAC
ATCGTCATCG GCTGGACCAC ATTGCAGGCT GAACGCAAGG GGATCAGTCC GGCGAGCTGG
GTCAAGCCGC TGGTCTATCT GTCCATTTTC TGGGCGTTCA GTATCCACAC GGTCACAGCC
TTCTTGTACC AGGGGCTGCC GGGCCGGCAT TACTGGTTGA CGGCGATCAT GGCCGCGCGG
TTTTTGTCCT CGGCCTTTTG TTCAGGGCCG GCGATCCTGC TCTTGCTGGC CTTGATCCTC
AAGCGGGTCG CCAAGTACGA TCCGGGCAAG GAAGCGGTGC AGACCCTGGC CAAAATCATC
ACCTACGCCA TGTGCGTGAA CGTCTTTTTC TTCCTGTTGG AAGTCTTTAC CGCGTTCTAC
AGCAACATCC CCGGCCACTA TACGCCGCTG GTGTATCTCT TTTCCGGTCT GCACGGACAA
AGCGCCCTGG TCGGTTGGAT GTGGGCGGCA GTCGTCTTTG CTGTTGTCTC CCTGGTCCTG
CTTATTCCGC CGCGGTTTAG GAACAATCCG GAATTGTTGG TTCTGGCTCT CGTCTTCCTG
GTCATGGCGA CCTGGATCGA TAAAGGGCTG GGCCTGATCG TCGGCGGCTT CATTCCCAAT
CCGTTTCATG GTGTGACGGA ATACGGTCCG ACCGGTCCGG AACTCATGAT CGCCCTTATG
ATTTATGCCA CAGGAGCCCT GGTACTGACA GTGCTCTGGA AGGTGGCCAT CGGGGTCAAA
AAGGAGATCG GCGCGGTCTG A
 
Protein sequence
MLEKALYGDK RYWSWVIFLL ALIGIGSTFY FMQLSQGLKV TGMNRDVSWG FYIAQFTYLV 
GVAASAVMLV LPYYLHGYKK FKNMIILGEF LAIAAVIMCL GFIVVDLGQP QRLMNVILHP
TPNSILFWDM IVLNGYLILN IVIGWTTLQA ERKGISPASW VKPLVYLSIF WAFSIHTVTA
FLYQGLPGRH YWLTAIMAAR FLSSAFCSGP AILLLLALIL KRVAKYDPGK EAVQTLAKII
TYAMCVNVFF FLLEVFTAFY SNIPGHYTPL VYLFSGLHGQ SALVGWMWAA VVFAVVSLVL
LIPPRFRNNP ELLVLALVFL VMATWIDKGL GLIVGGFIPN PFHGVTEYGP TGPELMIALM
IYATGALVLT VLWKVAIGVK KEIGAV