Gene Dret_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0160 
Symbol 
ID8417964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp203491 
End bp204273 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID645036725 
Productanaerobic cobalt chelatase 
Protein accessionYP_003197040 
Protein GI258404298 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4822] Cobalamin biosynthesis protein CbiK, Co2+ chelatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.478118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.129595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT CGATCGCCAT TGTCTGCACC ACCTTCGGCA CTGCCAGCCA ACGGGGCTTG 
GAAACCCTGC GGACCTATCA GGAGGCGGTG CAGGACCGTT TTCCCCAGGC TGATATCCAC
TGGGCGTTTC TCTCCAAACG CATGCGTTCC CTGCGCAGAA ACGCGGGCGG CTCGGTGGAC
AGTCTCCCCG CCGTACTCAC CAGGTTGAGC CAGGAAGCCA CGACACGCAT CATTGTCCAC
CCCTTACAGG TCATCCCGGG CAAAGAGTAC GGAACGATCC GGCAAACCGT CAGGGCCTTG
GCCCATCTGC CGGAGAAACC GGACTGCCAC GTCACAGCAC CGCTGTTGTG GGAACCTGCC
TCCGTCGCAC GCCTGGGAGA AGCGCTCCTC GCTGAAGACG GAGCGCCGGG ACTGGAAAAC
CAGCTCGTCT ATATGGCCCA CGGCTCGCCC GAACCAGGAC ACGCCCTGTA TGTAGCCCTG
GCCCACTGGC TCGCCTGGCG TCAGCCGCGG ATCCTGCTCG GGAGCATGGA GTATTGGCCG
ACACTCGACG ACCTGCTCCA ACGCCTGGAC CCCGGCACGC CCCAATTACG ACTCATCCCC
CTGCTGACCT TGATCGGCAC CCACGCCCAA CGTGACTTGG CCGGGGAGGA ACCGACCTCA
TGGCGGTCAC GGTTGACGGC GGCCGGATTC GCTCCCCAAG CTGAGCTCAG AGGACTTCTG
GAAAAACCAG CCGTGACCCG GCTGTGGCTG GAGCGGTTGG CAGAAGTCGT TACGAACGGG
TAA
 
Protein sequence
MTASIAIVCT TFGTASQRGL ETLRTYQEAV QDRFPQADIH WAFLSKRMRS LRRNAGGSVD 
SLPAVLTRLS QEATTRIIVH PLQVIPGKEY GTIRQTVRAL AHLPEKPDCH VTAPLLWEPA
SVARLGEALL AEDGAPGLEN QLVYMAHGSP EPGHALYVAL AHWLAWRQPR ILLGSMEYWP
TLDDLLQRLD PGTPQLRLIP LLTLIGTHAQ RDLAGEEPTS WRSRLTAAGF APQAELRGLL
EKPAVTRLWL ERLAEVVTNG