Gene Dret_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0156 
Symbol 
ID8417960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp199625 
End bp200317 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID645036721 
ProductGntR domain protein 
Protein accessionYP_003197036 
Protein GI258404294 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.108623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA CGGTAACGCC GGCGCGCAAG CCCAAAGTGT ATGAAGAAGT GGTGCGCCAG 
ATCGAGGAGT TGATTGCCAG TGGTGCCCTG CGCGATGGTG ACCGTTTGCC ACCGGAACGG
GAACTGGCTC AGCTGTTCAA GGTCTCGCGG AATTCCGTGC GCGAAGCGGT TTTTGCCCTG
GAAAACCGCG GTTTGGTGGT CAGCAAGGTC GGGGCCGGAA CCTTTGTCCG CGGCGCGGAA
CAGGACTTGA TCGATCCTTT GGCCCGGGCC ATTGAGCAGC AGCGGCAACG GCTGCACGAG
ATCTTTGAGT TCCGGCTGCT TTTGGAGCCG CAGATTATCG GCTTGGCGGC CTTGCATGTT
TCCGGGGAAC AACTCCAGGA ATTAGAGGCC CTTGTAGCGG CCCAGGAGGC ACGGATTGCC
GAAGGCCTGC CCTGGGGGGA TCTGGACAGC CGTTTCCACC GCCTGATCGT GCAGGCCTCG
GGCAATCAGG TCCTTTGCAA GGTCTTCCAG CAATTGGATG CTATTCTGGA CGAGGTCCGC
GACGAAACGC TCCAGACGGC AAGTCGAGCC CGGGAATCCC TGGCGACCCA CCAGCGCATC
GTGGAAGCGT TGCGCCGTGG TGACCCCGAG GCCGCCTCAC GGGAAATGGA GGACCACCTC
ATCGGGGTCG AGGAGGCCAA GGACCGGTCG TAA
 
Protein sequence
MDFTVTPARK PKVYEEVVRQ IEELIASGAL RDGDRLPPER ELAQLFKVSR NSVREAVFAL 
ENRGLVVSKV GAGTFVRGAE QDLIDPLARA IEQQRQRLHE IFEFRLLLEP QIIGLAALHV
SGEQLQELEA LVAAQEARIA EGLPWGDLDS RFHRLIVQAS GNQVLCKVFQ QLDAILDEVR
DETLQTASRA RESLATHQRI VEALRRGDPE AASREMEDHL IGVEEAKDRS