Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0156 |
Symbol | |
ID | 8417960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 199625 |
End bp | 200317 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645036721 |
Product | GntR domain protein |
Protein accession | YP_003197036 |
Protein GI | 258404294 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.108623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCA CGGTAACGCC GGCGCGCAAG CCCAAAGTGT ATGAAGAAGT GGTGCGCCAG ATCGAGGAGT TGATTGCCAG TGGTGCCCTG CGCGATGGTG ACCGTTTGCC ACCGGAACGG GAACTGGCTC AGCTGTTCAA GGTCTCGCGG AATTCCGTGC GCGAAGCGGT TTTTGCCCTG GAAAACCGCG GTTTGGTGGT CAGCAAGGTC GGGGCCGGAA CCTTTGTCCG CGGCGCGGAA CAGGACTTGA TCGATCCTTT GGCCCGGGCC ATTGAGCAGC AGCGGCAACG GCTGCACGAG ATCTTTGAGT TCCGGCTGCT TTTGGAGCCG CAGATTATCG GCTTGGCGGC CTTGCATGTT TCCGGGGAAC AACTCCAGGA ATTAGAGGCC CTTGTAGCGG CCCAGGAGGC ACGGATTGCC GAAGGCCTGC CCTGGGGGGA TCTGGACAGC CGTTTCCACC GCCTGATCGT GCAGGCCTCG GGCAATCAGG TCCTTTGCAA GGTCTTCCAG CAATTGGATG CTATTCTGGA CGAGGTCCGC GACGAAACGC TCCAGACGGC AAGTCGAGCC CGGGAATCCC TGGCGACCCA CCAGCGCATC GTGGAAGCGT TGCGCCGTGG TGACCCCGAG GCCGCCTCAC GGGAAATGGA GGACCACCTC ATCGGGGTCG AGGAGGCCAA GGACCGGTCG TAA
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Protein sequence | MDFTVTPARK PKVYEEVVRQ IEELIASGAL RDGDRLPPER ELAQLFKVSR NSVREAVFAL ENRGLVVSKV GAGTFVRGAE QDLIDPLARA IEQQRQRLHE IFEFRLLLEP QIIGLAALHV SGEQLQELEA LVAAQEARIA EGLPWGDLDS RFHRLIVQAS GNQVLCKVFQ QLDAILDEVR DETLQTASRA RESLATHQRI VEALRRGDPE AASREMEDHL IGVEEAKDRS
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