| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0107 |
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| Symbol | |
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| ID | 8417911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 142274 |
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| End bp | 143521 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645036672 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003196987 |
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| Protein GI | 258404245 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTT CCAGTAAAGT GGTCCGCAGT GTGGTGCTCA TTGCCGGCCT GATTGTCATC
AGTATCGCCG TTGCCCTGTA TATCCTGCGT CACCCGCCCA AGCAACCCAC TCCCGGCGAG
GCCATGGACC CTCGCGTGGA AGTGCAGGTC CAAGCCATAC AACCCCGCGT GTTCCAGCGC
AAGTTTACGT TGTGGGGGAC TGTCCACCCC AAGCGCCAGG CAGCTGTTGC AGCCGGTGTC
GCCGGCGACG TCCAATGGGT CAGTCCGCAA TGCGAACCGG GGGAAATGGT GGAGGCCGGG
CAAGCCCTGC TCCGTCTGGA CGAGCGAACC TTCCGGGCCG TTTTTGAAGA AGCCCGGGCG
CAAGTGGCCG AGGCGCAAGC CGCGCTGGCC CTGCAGCGCC TGGACAACGC CAAGCAGGAA
AAAATCCTCG AACAATTGCG TCAGCAGGTC CAGGCCGCCC GGGCCAGCCT GCAGCGGTTT
ACGACCCTGC GCCAGCGTGA AACCATCTCT CAGGCGGAAC TCGACCGGGA GCAGGAACGT
GTCAGTGATG TCGTCAGCCG GTTTGTGCAG CAACGCGAGC AGGTTCGCAC GGCCGCTGCG
CAATTGGAGC GGGCCGAAGC CGCGTTGGCC GGGGCCAGGG CCCGGCAGGA CCGGTCCCGG
GCTGACCTCG AACGGACCAC GATCCGGGCC CCGTTCTCCG GCAGGGTCAT GCGCCGGGAG
GTGGATACGG GCGACCGGGT GACGGTTGGA CAGCCAGTGT TTCATCTCGG GCAGTTCCGT
GAAGTCCGGG TCGCGGTGGA GATCCCGTCC AGTCGGCTCG CTCTGGTGCA TAAAGGGGTG
AAGGCCACGG TCCGTTTACC ACAGGCGTCC CGCCAATGGG AGGGGCGACT GGTGCATCTG
GCACCGTCGG GCGACGCCGA GACCCGCCTT TTCCCCGCTG AAGTGGCGGT GGAGAACACA
ACTGCCCCGC TTCTGCTCGG CGGGCAATTC GTCGCCGTCG AGTGCGCGGA GCGCGACCCA
AAACGGTATA TGGCCGTGCC CTTACGCGCC ATCGGCCAGG ATGACGAAGG GGATTACGTC
TTTGTCGTTC AGGGGGATCC CCTGAGGGCG GTGCGACGTT CGGTTCAACG GCTCTGGTTT
CAGGACGGCG AGGTCCTGGT CACCGGCCTC CAGCCCGGGG ACCGAGTTGT CGTTGAAGGG
CAGGCGGATT TGAGCTCAGG CACTGCTGTC AAAGTGGGGC GGTCATGA
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| Protein sequence | MALSSKVVRS VVLIAGLIVI SIAVALYILR HPPKQPTPGE AMDPRVEVQV QAIQPRVFQR
KFTLWGTVHP KRQAAVAAGV AGDVQWVSPQ CEPGEMVEAG QALLRLDERT FRAVFEEARA
QVAEAQAALA LQRLDNAKQE KILEQLRQQV QAARASLQRF TTLRQRETIS QAELDREQER
VSDVVSRFVQ QREQVRTAAA QLERAEAALA GARARQDRSR ADLERTTIRA PFSGRVMRRE
VDTGDRVTVG QPVFHLGQFR EVRVAVEIPS SRLALVHKGV KATVRLPQAS RQWEGRLVHL
APSGDAETRL FPAEVAVENT TAPLLLGGQF VAVECAERDP KRYMAVPLRA IGQDDEGDYV
FVVQGDPLRA VRRSVQRLWF QDGEVLVTGL QPGDRVVVEG QADLSSGTAV KVGRS
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