| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3944 |
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| Symbol | |
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| ID | 8430959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4119730 |
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| End bp | 4121721 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645036162 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_003193260 |
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| Protein GI | 258517038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00146651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.690389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTCG GAAAAGGCAG TTGGAAAAGT TTTGAGCAGG GTGCGGAGAA GGAATGGCTG
GTTGCCAACG GTCTGGGCGG CTACGCGGCC GGTACTGTCA TAGGGGCTAA CGCCAGCAAA
TACCATGGCC TGCTGGTGGC CGCCTTAAAT CCTCCGGTTG AGCGGGTTGT TTTGCTGGCC
AAGTTGGATG AACAAGTGGA GGCGGGGGGC ATTACTTACA ACCTTGCTTC AAACCAGACC
AACGGCGAAG TAACCCACTT TGGCTATGTT CACCTGCAGC GGGTGATCAT TGATCCATTG
CCCTGTTTTA TTTACAGTTT TTCTGATATA ACTATGGAAA AACATGTATT TATGCTGCGT
GATCAAAATA CTACGGTGAT TTTATACCGT TTTTACAATG GGGCCCTGCC CGCTACATTA
CGCTTTACAC CTCTGGTAAA CTGCCGTGAT TTTCATCACA ATACTTACTA TGGGCAGTTG
AATTTCAACA GCCAGCCGCT AAAGCGCGGT GTGGCGGTCA GTGCTGTTTC CGGAGTACCT
CCGCTGAAAA TTATCAGCAG CGCGGGAAGA TTCAATAAAC GGGATGACTG GTATAAAGGC
ATGTATTATG CCAGAGAGCG GGAGCGTGGG CTCAATCCTT ACGAAGATCA CTTTATGCCC
GGATATTTTG AGGTAAAAAT TGATTCCGGG GAAGTCAAAA CCATAACTGT GGTGGCCACC
ATAGAAGAAA AATTTCCTGC GGATCAAATT GCCGCCAACG GTGAGGGGTA TCTTTTGCAG
GAAAAGGTTC GATTAGAACA ATTACAGGCT CAGGCCGGAT ACAGTGAACC TTTGGCCAGG
CAGCTGGTCT GGGCGGCAGA CAGTTTTATT GTACACCGCC GCTCGACCGG CACTAAGAGT
GTTATTGCCG GTTATCCCTG GTTCAATGAT TGGGGCAGGG ATACTATGAT TGCCTTACCG
GGGCTGACTT TGATCACTCG CCGGTTCGAG GACGCCAGAG AAATATTGAG TACCTTTGCG
CGCTATTGTA AGGATGGCCT TTTGCCCAAC ATGTTTGCCG ACGGTGACAG GGAACCTCTT
TACAATACAG TAGACGCCTC TCTCTGGTAT TTTCAGGCTG TTTATAAGTT CCTTGAATAT
ACAGGCGACT TTGATTTTAT CAGGTCGGAA ATTTTTCCCG TATTGAGGGA TATCATTTAC
TGCCATGTGC GAGGAACACA TTTCAACATT AAGGCTGATG AGGATGGTTT GCTGCAGGCA
GGCTCCCCTT CCCTGCAGCT CACCTGGATG GATGCCAAGG TAAATGACTG GGTAGTTACT
CCCAGACACG GCAAACCGGT GGAAATTAAT GCTCTCTGGT ATAACGCGCT ATGCGTATAT
GAAAAGTTAT GCCGGCACTA CGGTGAAATA TTTCCCTACG GCGACCTTCC CGGTAAAGTA
GAAAACAGTT TTATCAAGCA GTTCTGGTAT TCTGATGCCG GTATACTCTA TGATGTAATC
GGGCCTGACG GTAAAAAGGA CGCCAAATTG CGGCCTAATC AAATTATAGC GGTAAGCCTG
CCTCATTCGA TGCTGTCTAA AAATAAAAGT ATGATTATAT TAAGAAGGGT CTGGCAGGAG
TTATACGCTA CTTACGGTTT GCGCAGTCTT TCCTTGAGAG ACCCGGAATA TAAGGGCGTT
TATACAGGCG ATCAATTGTG CAGGGACGGC GCCTATCACC AGGGGACGGT TTGGGGCTGG
TTAATCGGAC CGTTTATCAG CGCCTACAGG AGGATCAATG CCTATTCGCC TGCCAGCCGC
GAGCAGGCGG AGAGGTTTAT AGCTCCTTTT ATTGATCACC TGCGGGATCA CGGGGTTGGC
TTCATCTCGG AAATTTTTGA CGGCAACGAG CCGGTCAAAC CCAGAGGTAC TTTCGCCCAG
GCCTGGAGTG TGGCCGAAGT CCTCAGGGCT TATGTCGAGG ATGTGTTGGA GATTAAACCG
GGTCGTGGCT AG
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| Protein sequence | MYFGKGSWKS FEQGAEKEWL VANGLGGYAA GTVIGANASK YHGLLVAALN PPVERVVLLA
KLDEQVEAGG ITYNLASNQT NGEVTHFGYV HLQRVIIDPL PCFIYSFSDI TMEKHVFMLR
DQNTTVILYR FYNGALPATL RFTPLVNCRD FHHNTYYGQL NFNSQPLKRG VAVSAVSGVP
PLKIISSAGR FNKRDDWYKG MYYARERERG LNPYEDHFMP GYFEVKIDSG EVKTITVVAT
IEEKFPADQI AANGEGYLLQ EKVRLEQLQA QAGYSEPLAR QLVWAADSFI VHRRSTGTKS
VIAGYPWFND WGRDTMIALP GLTLITRRFE DAREILSTFA RYCKDGLLPN MFADGDREPL
YNTVDASLWY FQAVYKFLEY TGDFDFIRSE IFPVLRDIIY CHVRGTHFNI KADEDGLLQA
GSPSLQLTWM DAKVNDWVVT PRHGKPVEIN ALWYNALCVY EKLCRHYGEI FPYGDLPGKV
ENSFIKQFWY SDAGILYDVI GPDGKKDAKL RPNQIIAVSL PHSMLSKNKS MIILRRVWQE
LYATYGLRSL SLRDPEYKGV YTGDQLCRDG AYHQGTVWGW LIGPFISAYR RINAYSPASR
EQAERFIAPF IDHLRDHGVG FISEIFDGNE PVKPRGTFAQ AWSVAEVLRA YVEDVLEIKP
GRG
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