| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3938 |
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| Symbol | |
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| ID | 8430953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4113068 |
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| End bp | 4114486 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645036156 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_003193254 |
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| Protein GI | 258517032 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000403843 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.477567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGG GTTATGGCTT GCATGTTGAG CAGACACAGA AATTAATCAT GACCCCGGAA
TTGCGCCAGG CCATTACCGT TTTACAGTTG TCTTCCCTTG AGTTGAGCAT GTATATAGAC
CAGCAGTTGC AGGAAAACCC TATGCTGGAG GTTCGAGAAG ATGATTTAGA CCGGATTGAG
GAAAATGAGG GAGCAGAAGG CGACGCTAGC GGGGGGGAAG AGGAATTATC CCGGCAGGAA
TGTGATGTGG ACTGGGAAGA ATATTTTCAC GACAGTGACT TGGATTTGGG CCGCAGGGAA
AAATTAGCGG AGCAGTCCGG GAGCGGCTAT GAAAATTTTT TAACGCAGGC TCCAAATCTA
ACTGAATATT TGATGATGCA GTTAAATTTG AGCCGGTGCG GGGATTATTT AAAAGCTATC
GGTGAGTATA TTATAGGTAA TGTTGACCAC AACGGCTACC TGCACGTGTC AGTGAAGGAG
ATTGCCGAGC AATTAGAGGT AAGCCAGTCT AAGGTGGAGC AGGCTTTATC TGTTATTCAA
TCCTTTGATC CGCTTGGTGT CGGCGCTTCG TCTTTGCAGG AATGTTTGCT TATTCAGGTG
CGGTATTTGA ATATAAAAAA TAAGCTGGTT GCGGAACTGA TTGAAAAATA CTTGCCGGAT
ATTGCTAAAG GCAGGCTTAA CCAGATAGCT CAGCAGTTAG GAGTTGCAGT GACGGAGGTG
CAGGAGGCAG CAGATATTAT TAAGACGCTG GATCCCAAGC CCGGGCGCAA TTTTAGCGCT
ACGAACGATG TTCGCTATAT TGTTCCGGAT GTGATAGTAG AGAGAGTCGA AGGAGAATAT
ATTATTCTGG TTAACGATTC ATCGGTGCCT CGCCTGACTA TAAATACTGC ATATCGCTCT
GTTTTAACAC AGGATAAGTT TGATCTTCAG ACTCGCCGTT TTGTAGAAAG TAAACTCAAT
TCCGCTGCCT GGTTGTTGAA AAGTATTGAG CAGAGGCGCC TGACTTTATA TAAAGTAGCC
AGTTGCTTAG TTGATTTGCA GAAGGATTTT ATGGAATACG GTGTCAAGCA TTTGAAACCG
CTTAATTTAA AAACTGTAGC GGAAATAGTT GGCTTGCATG AATCGACTGT GAGCAGGGCC
ACCTCCAATA AGTACATTCA AACCCCGCAA GGCGTGTTTG AGATGAAATT TTTCTTTTCT
ACCGGCCTGA CTTCCGCCGG TGGAGGAATG ACTTCGGCTG AGAGTATTAA GAAGACACTC
AGAGAATTGA TTGCGTCTGA AGATGCCAGA AAACCGCTTA ATGATCAGAA GATCTCGGAT
ATTTTTGCCG AGCGAGGGAT AAAGATTTCT CGCAGGACGG TGGCTAAATA CAGGGATGAA
CTGAATATTC CTCCTTTGAA GCAGAGAAAA CGCTATTAA
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| Protein sequence | MRMGYGLHVE QTQKLIMTPE LRQAITVLQL SSLELSMYID QQLQENPMLE VREDDLDRIE
ENEGAEGDAS GGEEELSRQE CDVDWEEYFH DSDLDLGRRE KLAEQSGSGY ENFLTQAPNL
TEYLMMQLNL SRCGDYLKAI GEYIIGNVDH NGYLHVSVKE IAEQLEVSQS KVEQALSVIQ
SFDPLGVGAS SLQECLLIQV RYLNIKNKLV AELIEKYLPD IAKGRLNQIA QQLGVAVTEV
QEAADIIKTL DPKPGRNFSA TNDVRYIVPD VIVERVEGEY IILVNDSSVP RLTINTAYRS
VLTQDKFDLQ TRRFVESKLN SAAWLLKSIE QRRLTLYKVA SCLVDLQKDF MEYGVKHLKP
LNLKTVAEIV GLHESTVSRA TSNKYIQTPQ GVFEMKFFFS TGLTSAGGGM TSAESIKKTL
RELIASEDAR KPLNDQKISD IFAERGIKIS RRTVAKYRDE LNIPPLKQRK RY
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