| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3861 |
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| Symbol | |
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| ID | 8430875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4048486 |
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| End bp | 4049985 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645036087 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003193186 |
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| Protein GI | 258516964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.94141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGTAAGAG AGTATTTCAG AGGTTTGAGC CGGTTTTCAA ACATTTTATT GTTGAATATG
GATTTTAAAA ACCATCTGGA ATTTGAAAGA AAGCACCTTC TGTTAAGTTT GCAGAGGGGG
GAAATCTTCA CCGGGTTTGT TTTCATTTTA AGTTTTTTAA ACTTTTATTT GGATTTTATA
CTGCATCAAG ACCCTTCTGT GGATATTATA TACCTCCGGA ACCTTTTCAC AATGCACGTT
ATCATTTTTC TGCTCTCAAT AGTCTATCTT GTAGCCTATA GCTTGCTTAA GAAGAATCTT
CCAAACTCTT GTGCTGCCAA AGCTTTGCTC CTTTCTGAAA TATCCCTAAT TGTTTTGTTC
GCATCCGCTC TATCTTTAAA CAGCCAAAGA TTTACCGGAA ACATTAATGC ATACATTATG
ATTGTCCTTG CGGCAGCGCT GGTCATTCCT ATTTATCCGA AATGGGTGCT TTCGATTTAT
GCTGTGAACC ATATGCTATT TCTGATCGGC CTTTCCTATT TGTGCACGGA TAATTCCGTT
GTTGTCAAGC AGTTTAATGC TACTACCACC ATATTGATAG CGGCTGTTTT GTTCCTACTC
TTATATCGCT ACAATGTGAC AAACTTCTTA AATGAGGAAA TGCTCAAAGA AGATAGACAG
ACTTTTATTA AACTGTTTGA GATCAATCCC TTTCCTCTGC TGATCTGCAG GTTTGATGAT
GGGAAAATCC AGTACGCAAA CAATAGAGCT GTGTTGTTTT ATGGGCTCCC AGAGGAGCCA
TCTGATGATT TAAACTATAC ACATTTCTAT AAAAACGTCC AGGATTTCAA CAGCATCCGC
AAGAAGCTGG AAGCGGACAG AAAAGTGACC GATTATTTAG TAGAGCAAAA GACATTGCTG
GGGCAGACTA AGTATACTGT TGTTAATTGC GAACTGATCG ATTATTTCGG TGAAAAGTCA
ATTTTAAGTG GCGTCGCGGA CATCAGTGAA ATAAAGAGGA TCGAAAACAA ATTGAACCTT
CATGCCTCCA CCGACCCATT GACCGGTGTT TTAAACAGAA GGGCCGGGAT GGATCTGCTT
CAGATGCGGT TTGAAGGCGT CCAGTGCGGG AAAACGGGAT TTAGCCTTTG TTTTTTTGAT
ATAGATAATC TTAAAACGGT AAATGATACC TTCGGACATT TGGAAGGGGA TGCTATGATT
ATCGACGTTT GCAAGGTTAT CATGCAAGAA CTGCATCAGG ACGACGTTAT TTTCCGCTAT
GGCGGGGATG AATTCGTGAT ATTATTCGAG AACAGCTGTG AACGGGAAGT CAGAGAAACC
TGTGCTCGAA TTGCACAGCA GTTTGAGGCC TTGAACCAAA GCAAACAAAA ACCTTATTGG
ATTGACGCGA GTTTTGGGGT ATTCTCGTAT AAACCGGAAA TGAACCTGAG CTTGGAGCGA
ATCATTGAAA TTGCGGATAA AGATATGTAT TACAACAAAG CAAAAAAGCA GGGTTTATAG
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| Protein sequence | MVREYFRGLS RFSNILLLNM DFKNHLEFER KHLLLSLQRG EIFTGFVFIL SFLNFYLDFI
LHQDPSVDII YLRNLFTMHV IIFLLSIVYL VAYSLLKKNL PNSCAAKALL LSEISLIVLF
ASALSLNSQR FTGNINAYIM IVLAAALVIP IYPKWVLSIY AVNHMLFLIG LSYLCTDNSV
VVKQFNATTT ILIAAVLFLL LYRYNVTNFL NEEMLKEDRQ TFIKLFEINP FPLLICRFDD
GKIQYANNRA VLFYGLPEEP SDDLNYTHFY KNVQDFNSIR KKLEADRKVT DYLVEQKTLL
GQTKYTVVNC ELIDYFGEKS ILSGVADISE IKRIENKLNL HASTDPLTGV LNRRAGMDLL
QMRFEGVQCG KTGFSLCFFD IDNLKTVNDT FGHLEGDAMI IDVCKVIMQE LHQDDVIFRY
GGDEFVILFE NSCEREVRET CARIAQQFEA LNQSKQKPYW IDASFGVFSY KPEMNLSLER
IIEIADKDMY YNKAKKQGL
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