Gene Dtox_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3520 
Symbol 
ID8430515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3724879 
End bp3725553 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID645035742 
Productphage shock protein A, PspA 
Protein accessionYP_003192860 
Protein GI258516638 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTAT TCAAAAGAAT AGGTGATAAT ATCAGGGCTA ACATAAACAG TTTGCTGGAC 
AAAGCTGAAG ATCCGGTGAA AATGCTGGAA CAATATTTGC GTGATATGGC TGAGGACATT
GCTGAAGCAG AAACTGCGGT AGCCAAACAA ATAGCTGTAG TTAAGAGATT TGAAGCGCAG
TACCAGGAAG CTCAGGCCAT GGTTGAAAAG AGGGAGAGCC AGGCCATGGC AGCTGTGGAA
AGCGGACGGG AAGACCTGGC CCGGCGTGCT CTGGAAGATA AGAGACTAAA TCAGACCAAG
GCAGATGAGT TTTACGCGCA ATACCAGCAA TACCGGGATG TGGCTGATCG GTTAAAACTC
CAGTTGACTG ATATGAAAGA AGAGTATGAG AAGATGAAGG CCAGGAAGGC CGCACTGGTA
GCCAGGGCCC AGGCCGCTAA AGCTCAGAAG AGCGTTAATG ATGTTATGTC CGGTTTTGGT
AAAAATAACG CCCGCGGCGG CTTTGAGCGT ATGGAAGAAA AAGTCCTGCA GGCCGAAGCA
GAAGCTCAAG CAGGCATAGA ACTGAGATCA TCCGGCGATA ATTTGGATGA TGAACTGGCA
GCACTGGGAC AGGGAACTTC GGATATAGAC ATAGAAATGC AGAGATTAAG AGAAAAGGTG
AAAAACAGGC AGTAG
 
Protein sequence
MSLFKRIGDN IRANINSLLD KAEDPVKMLE QYLRDMAEDI AEAETAVAKQ IAVVKRFEAQ 
YQEAQAMVEK RESQAMAAVE SGREDLARRA LEDKRLNQTK ADEFYAQYQQ YRDVADRLKL
QLTDMKEEYE KMKARKAALV ARAQAAKAQK SVNDVMSGFG KNNARGGFER MEEKVLQAEA
EAQAGIELRS SGDNLDDELA ALGQGTSDID IEMQRLREKV KNRQ