Gene Dtox_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3238 
Symbol 
ID8430232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3437106 
End bp3437600 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content40% 
IMG OID645035480 
ProductTrkA-C domain protein 
Protein accessionYP_003192599 
Protein GI258516377 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.574158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGA TAAAAGAAAC TGATCTTCCG GGTATTGGTA GAAAATTTCA AATTAATAGT 
CGCAGTGGTG ACAAGTTAGT AATCGTTGTT CACGACGATG GTCGACGCGA AATTCATCAT
TTCGATAACG ACGATCCCGA AGAAAGCATC TCGATGGTTA CATTGGATGA CACCGAAGCA
CGTCGTGTGG GTGGTATACT TGGTGGAATG GCCTATATAC CAAAGGCATT AGAATCAGTA
GATGTGGCAT TTGATGATAT GGTATTTGAG TGGTATAAAG TTGAACATGG TTCTAAGTCC
ATTGGTAAAA CAATTGGGGA ACTGCATGTT CGCAAAAAAA CAGGAGCTAT GGTTATTGCA
ATAATAAAAA AAGACCAAAA GATTATTAAC CCCGGTCCCG AAAATGCCAT TCCTGAAGGA
GCGGTTCTGG TTGTGATCGG TCTTAGGCGA CAAGTAAAAG CATGTAAAGA ACTAATTTTG
CACGGGAGTC TTTAA
 
Protein sequence
MSLIKETDLP GIGRKFQINS RSGDKLVIVV HDDGRREIHH FDNDDPEESI SMVTLDDTEA 
RRVGGILGGM AYIPKALESV DVAFDDMVFE WYKVEHGSKS IGKTIGELHV RKKTGAMVIA
IIKKDQKIIN PGPENAIPEG AVLVVIGLRR QVKACKELIL HGSL