| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3185 |
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| Symbol | |
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| ID | 8430179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 3384419 |
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| End bp | 3385348 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645035431 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003192550 |
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| Protein GI | 258516328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.991117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.361577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGA TAATTAATGT TTTAAAACCA CCCGGAATGA CTTCGCATGA TATAGTTAAT
TATATTCGTC GTTTAACAGG GATTAAGAAA GTCGGGCATA CGGGAACCCT GGATCCGGGT
GCGGCAGGGG TACTGCCGGT GTGTGTGGGT AAGGCCACGC GGGTTGCCGA ATACCTGATT
TCTTATGATA AGTGTTACCG TGCCGAATGC ACTTTGGGAG CCAGTACCGA TACACAGGAC
AGTTTTGGCC GGGTTCTGGA GGTACGGGAT GCTTCCTGTC TTGCCGTCGG TGATATTGAA
GCCATGCTAA TGACTTTTGT CGGCAGTCAG GAGCAAATCG TACCTATGTT TTCGGCTGTT
AAAGTTCAGG GGAAAAAACT TTATGAGCTG GCCCGAGCCG GGCAGCGGCT GGAACGTGAA
GCGCGCAGGA TAAATGTATA TTCAATTAAA TTGCTTGACT ACGAGGACCT GGGAACACCT
GCCCCCAGGG TTTTATTTGA AGTAACCTGC TCAAAAGGCA CTTATGTCAG AACCATTTGC
CATGATCTGG GGCAAAGGCT TGGTTATGGC GGGTACATGT CTTTTTTGAT CAGAACCAGG
GTAGGAGTAT TTGACCTTTC GAAATCCGTG ACGCTGGAGG AATTAAAGGA ATACGCGGAC
AAGGGCCTGC TTAACCGGGC AATGCTGCCT ATTGACCTGG TTTTGAGTGA TATGGTGGCA
GTGCAGGTCC GGGAAAGCGC GGTTGCAGCA GTGAAGGCGG GAAACAGGTT ATACCTTCCC
GGAATAAAGG AAATGCCCGG CTGCCTGGCA GAAGATCAAA TTGTGCGTTT GCGCTCGGGA
GATAAGTTAT TGGCTTTAGC CAGAGTAATG TCAGAAGAAA AAGAAGGTAT CACCAAATAC
ATATTTCAAC CGTTTAAGGT ATTAGTTTAA
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| Protein sequence | MNGIINVLKP PGMTSHDIVN YIRRLTGIKK VGHTGTLDPG AAGVLPVCVG KATRVAEYLI
SYDKCYRAEC TLGASTDTQD SFGRVLEVRD ASCLAVGDIE AMLMTFVGSQ EQIVPMFSAV
KVQGKKLYEL ARAGQRLERE ARRINVYSIK LLDYEDLGTP APRVLFEVTC SKGTYVRTIC
HDLGQRLGYG GYMSFLIRTR VGVFDLSKSV TLEELKEYAD KGLLNRAMLP IDLVLSDMVA
VQVRESAVAA VKAGNRLYLP GIKEMPGCLA EDQIVRLRSG DKLLALARVM SEEKEGITKY
IFQPFKVLV
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