Gene Dtox_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3018 
Symbol 
ID8430008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3218078 
End bp3218335 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content35% 
IMG OID645035270 
ProductRNA chaperone Hfq 
Protein accessionYP_003192393 
Protein GI258516171 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTATA TCATTTTTAA GGAGTACAAG TCCATTATGA AACCATACGA TTTATCAGTA 
CAAAATAAAA TTCTGGTGCA GCTCAAAGAG CAGCAGGCAT CAATAATTGT ATATTTAATC
AACGGTTACC GTCTGGGCGG TAAGCTAAAG GATTTCGATA CATTTACCGT TATTTTAGAG
GAAAAAGAAA CTCAATATAT TGTTTACAAG CATGCCATCT CCACGATCAT TCCCGAAAAA
CTGCTCGAAA CAGTATAA
 
Protein sequence
MFYIIFKEYK SIMKPYDLSV QNKILVQLKE QQASIIVYLI NGYRLGGKLK DFDTFTVILE 
EKETQYIVYK HAISTIIPEK LLETV