Gene Dtox_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2972 
Symbol 
ID8429962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3158069 
End bp3158890 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content49% 
IMG OID645035226 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_003192349 
Protein GI258516127 
COG category[S] Function unknown 
COG ID[COG5551] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGCTA GCTGTGTTGT TTTTCTAAAA GTTAACAGGG AGGTGCTGGT ACCACCCTCA 
ATGGGACAGG TGTTGCATGC TTTCTTCCTG GATAGGGTCA GGCTCCTGAA CCCGGATTTA
GCAGGTCAGC TGCACAGCCC CACACCTTTA AAACCTTTTA GTGTCTCACC TCTTTTGGGC
AGGGTTATCT ATGAAGATAA CAGGTGGAGA TTGTTCCCCG GGGAGGCTTA TGCCTTTCGT
GTAACTTCTA TAGATCCCGA ATTCTCCAGG TGGCTTACTG ACAGCTGGGC CCCCTCGCTG
TCGGGAGAGA TTGGGCTGGC AGGGGCTGGT TTAGAGGTGG CTGGCTGGTC GTTAAACACA
GATGCTCACT CTTGGGCAGG CAGCACAAGT TATGAAGAGC TATATAGCAA TATTATATCC
TGCCCCGGGG CCGGTGACAG GATTACAATA GAATTTTATT CACCAACAAC CTTTAGGGCC
AGGGGCAGCA ATTATCCTTT GCCGGACCCC CAGAAAGTGT TTTTGAATCT GCTGCAGAAA
TGGAATTATT ACTCCCCGAT TAACCTGGGT GATAACTTTA TTGACTTTAT CCGGGAAAAC
GTTTTCCCCG GCTCGTATAA ATTGCAGACC AGGATAATGC ACTTTGACAA ATACAAGCAG
GTGGGCTTTA CCGGTACCTG TACCTTTAGG ATACGCCGGC AGGAGGAGGA TATTATAATA
AGCGTACTGC ATATGCTGGC GGAATATGCC TTTTATGCCG GAGTGGGATA TAAAACTACA
ATGGGCATGG GGCAGTCGAG GGCGGTGCAT ATAAGGCGTT AG
 
Protein sequence
MLASCVVFLK VNREVLVPPS MGQVLHAFFL DRVRLLNPDL AGQLHSPTPL KPFSVSPLLG 
RVIYEDNRWR LFPGEAYAFR VTSIDPEFSR WLTDSWAPSL SGEIGLAGAG LEVAGWSLNT
DAHSWAGSTS YEELYSNIIS CPGAGDRITI EFYSPTTFRA RGSNYPLPDP QKVFLNLLQK
WNYYSPINLG DNFIDFIREN VFPGSYKLQT RIMHFDKYKQ VGFTGTCTFR IRRQEEDIII
SVLHMLAEYA FYAGVGYKTT MGMGQSRAVH IRR