Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2776 |
Symbol | |
ID | 8429762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 2928000 |
End bp | 2929220 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 645035043 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003192170 |
Protein GI | 258515948 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00570116 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATTT GGAAAAGAAA TTTAATCGTT TGCTGGTTTG GGATGTTTGT GACAGGTGTG GGAATGAGCC AGATTGCCCC GGTATTACCG CTTTATATAA AGCACCTTGG AGTTCACAAT ACAGCTTTAA TTGAACAATT TTCGGGATTA GCCTTTGGTG TTACTTTTAT AATTTCAGCT GTTTTCTCTC CTATTTGGGG ACATGCTGCT GATAAATTTG GAAGAAAACC AATGCTTTTG CGGGCAAGCC TTGGTATGGC AATAGTTATT TTCAGTATGG GTTTTGCAAC AAATGTGTAC ATGCTGATAG GCTTAAGATT GTTGCAGGGA GTTATAACTG GCTACAGTTC AGCTTGTACC ACATTGATTG CAACTCAAAC AGATAAAGAA CATGCAGGAT GGGCTTTAGG AACGCTTTCG ACATCATCTA TAGCAGGTTC TTTGCTTGGG CCTTTGATTG GTGGCTTTAT CGAAGAGAAT TTTGGTTTGC AAAATATATT TTTTATAACT GGTGCACTGA TGTTGGTTGC ATTCATTACA ACTGCGTTAT ATGTAAAGGA ATCTTTTAGT CGTCAAGATA AAAAGGTACT TGGTACTAAG CAAATATGGG GAATTATTCC GAACAAAAGT TTGATTATTA CAATGTTTGT AACCTTTTTT GTGTTATACA TGGCATTATA TTCTGTTGAA CCAATCATAA CAGTATATAT TAGCCAGTTA TCAAGTAATA CAGGTCATGT TGCTTTATTG GCCGGAATAG CATTCTCAGC TTCAGGACTG GCAAGTATAA TTTCGGCTCC AAGATTGGGG AAAATTTCAG ATAAGATAGG ACCTCAGAAG GTTATGTTAG TTGCAATTGC ATTGTCGGGA CTAATTTTTT TACCTCAAGC CTTTGTAACA AATCCTTGGC AGTTAATAGT GCTTCGTTTT TTATTAGGAA TAGCAACTGC TGGGTTGGCT CCTTCTGTTA ATACCCTGCT TAAGAAAATT ACACCGGAAG CTTTTGCGGG TAGAATATTT GGTTTTAACA TGTCGGCAGG GTATTTAGGC GCATTTGGAG GTTCACTTTT AGGTGGGCAA GTGGCAGCAT ATTTGGGTAT CAAATACGTA TTTTTTATTA CCAGTACATT GCTACTGATA AACACAATAT GGGTTTATTT TAAAGTATTT AAAAAGCTAA GTTTAAATAA TAAGCTGGGC ACACAATTGG AACAAGCCTA A
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Protein sequence | MPIWKRNLIV CWFGMFVTGV GMSQIAPVLP LYIKHLGVHN TALIEQFSGL AFGVTFIISA VFSPIWGHAA DKFGRKPMLL RASLGMAIVI FSMGFATNVY MLIGLRLLQG VITGYSSACT TLIATQTDKE HAGWALGTLS TSSIAGSLLG PLIGGFIEEN FGLQNIFFIT GALMLVAFIT TALYVKESFS RQDKKVLGTK QIWGIIPNKS LIITMFVTFF VLYMALYSVE PIITVYISQL SSNTGHVALL AGIAFSASGL ASIISAPRLG KISDKIGPQK VMLVAIALSG LIFLPQAFVT NPWQLIVLRF LLGIATAGLA PSVNTLLKKI TPEAFAGRIF GFNMSAGYLG AFGGSLLGGQ VAAYLGIKYV FFITSTLLLI NTIWVYFKVF KKLSLNNKLG TQLEQA
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