Gene Dtox_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2248 
Symbol 
ID8429231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2419762 
End bp2420112 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content38% 
IMG OID645034555 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003191685 
Protein GI258515463 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00529166 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATACTAG ATATGAAAAC TATTGGAGCT AATATAAAAG AATTAAGAGA CAATGCTGGT 
TTAGGACAAA AGCACATTGC TGGTTATCTT GGTGTAGACC AAAGTCTGAT TTCAAAATTT
GAATCAGGAG AGCGTGCCAT TAGTTCGGAT ATGCTGGATA AAATTGCAGC TTTATTTTGC
TGCCCAGTAT CAGTCATTGC ATCACCAGAT AAGTGCAGAT CATCTGTAAG CTTTGCTTTT
CGCACTACGG GGATTGAATG TGAAGATTTG GAGGCTCTGG CTGTAATTAA TAGAATTGCA
TTGAACCAAA TGCTGATGGA TAAAATCGCT GGAGGGACAA TGAATGATTG A
 
Protein sequence
MILDMKTIGA NIKELRDNAG LGQKHIAGYL GVDQSLISKF ESGERAISSD MLDKIAALFC 
CPVSVIASPD KCRSSVSFAF RTTGIECEDL EALAVINRIA LNQMLMDKIA GGTMND