Gene Dtox_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2082 
Symbol 
ID8429064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2258786 
End bp2260060 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content42% 
IMG OID645034403 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003191534 
Protein GI258515312 
COG category[L] Replication, recombination and repair 
COG ID[COG4581] Superfamily II RNA helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.239089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCA AGAAAACTAA TGATGTGAAA GAAAAGATGC TTGATACTTT GTTGCTCTAC 
GGGCCTATAG ACATTATCCA GCTATGCGCC AGAATCAACA GCACACCTGA CCTTATAATC
GGTGCATTAC AATCCATACT GTTTCATAAA GATTTAATTA TGACCAGATC AGAGGTCAAT
AACCGTATTA CTACTTGGGT AGCCCACAAG AGAACACAGA GAAAAAAATT GCTTAAAATT
GCTGATTTGG CGGACTGGAC GGATAAGAAA ACCTTTTTAA ATTTAAAGAA GCTGAGAAAA
CAGCTTACTG ACGGTAATTT TGGGGATATA GAAATTTTAC CGGACAGAAA GCAAGCAGCC
GTAAAGAAAG CAGCAGGGAA GAATTTTAGT ACAGCCAACA AGCTGAAAGC AAAGTCTGTT
CCTGCTCCGA TGATTGTTTA TAAAATGCTG CCCGAGCAGG TTGTGCCGCA GCCTTATATA
GGCAATGATT TGACAGTTGC CGAGGAGCAA ATTGATGAGA TTTTCGGTTT GGATACCGCT
ATCTCAAATC ATGACAGTCC TTTTAAACTT GATAAATTTC AGAGAGTCGC TATTAATGCG
GTGCTGGCTG GAAACCTGGT GCTGGTATCG GCGCCTACCG GCACTGGTAA AACATTAATT
GCTGAAAAGC TGGCGGAACA ACTTTTAGAG AACAATTTGA GGATGATCTA TACCTCGCCT
CTTAAGGCTT TGTCCAATCA AAAATACCGG GATTTTAAAG AAATGTTTGG GCCCGACAGA
GTTGGTTTAG TAACCGGAGA TGTTTCAATT AACGGTTCAG CCTTGCTTTT GGTTATGACG
ACTGAAATAT TTCGCAATAA ATGCTTTGGA GAGCCTGAGG AACTTGCAGG TGTAGGATAT
GTAGTATTTG ATGAAATCCA TTATTTAGAT GATCTGGCCA GAGGCACTGC CTGGGAAGAA
AGCATTATTT TTGCTCCTCA GCAGGTAAAA ATACTGGGGT TGTCAGCTAC TGTTCCTAAT
ATAGCTGAAC TGGCCGGCTG GATTGCCAGT GTCCGTAAGA CACAGGTAAT TGTGGTAGAA
GAAAAGATAA GGATAGTGCC GCTGGAAATG AGGTGGCTTA CTGCTGAGGG TAAGGCTGTA
GATATGGAAG AGGCGGAAAA AGCGATTGAA GATTACATAG TGGCAAAGGA AAATCTTAAA
GAGCAAAGGT TTGCTCAAGA GGACAGACCT GATTACCAGA AAAAATATGA CTGGAGGCGT
GGTCTGCATA GATGA
 
Protein sequence
MVAKKTNDVK EKMLDTLLLY GPIDIIQLCA RINSTPDLII GALQSILFHK DLIMTRSEVN 
NRITTWVAHK RTQRKKLLKI ADLADWTDKK TFLNLKKLRK QLTDGNFGDI EILPDRKQAA
VKKAAGKNFS TANKLKAKSV PAPMIVYKML PEQVVPQPYI GNDLTVAEEQ IDEIFGLDTA
ISNHDSPFKL DKFQRVAINA VLAGNLVLVS APTGTGKTLI AEKLAEQLLE NNLRMIYTSP
LKALSNQKYR DFKEMFGPDR VGLVTGDVSI NGSALLLVMT TEIFRNKCFG EPEELAGVGY
VVFDEIHYLD DLARGTAWEE SIIFAPQQVK ILGLSATVPN IAELAGWIAS VRKTQVIVVE
EKIRIVPLEM RWLTAEGKAV DMEEAEKAIE DYIVAKENLK EQRFAQEDRP DYQKKYDWRR
GLHR