Gene Dtox_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1779 
Symbol 
ID8428750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1882693 
End bp1884087 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content42% 
IMG OID645034113 
Producthypothetical protein 
Protein accessionYP_003191255 
Protein GI258515033 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0201649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.532071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGATA AGGAGGATTA CAAGCAGCAG TCGGATAATG TATTGCCAAT GGAAAAATGG 
CGTCAGGAGA AGACGACTGT TTCCGGAGAC AGTGTGAGTT TATTGCTGGA GCACATGAGA
ATGGTCAGGC AGTCGGTTCC GGTAAATGAC CGGCTTAAAG AGGAATTGCG CCAGAAGATG
TTTCCCAAAG CTGCTGAGTC GCAGTCAGTA GAACCAGGGC CGGAAAACAT TAAAGAACAA
CAGTCAGAGA GTAAAACAGG TTTTAGAAAA AAACTAAAGT GGTACGGTAT TCCGGCAATT
CTTGCGATAT TATTATGTAT TATTTGGTTT GGGCAAGCAG GAGGTTACAG TAAACTGGAA
ACCGTGGGTG ATTTGCAGGA AGTGGCTCGT TACTGGTCAG ACAAAGAAGA TTTACAACCT
GCTGTTAGTC CTGACGGAAA AAAGTTATTA CTGACCAGAA GCGGTTTATT GCTTATGCTG
GATCAAGACG GTACGCAAAG AGTTCTCTTG CAGCCGCAGA TAAATGAAAA ATATACTTAC
CCGTCCTGGA CTTCTGACGG AAATAAAATT ACTTTGGTCA AAAAAATCAA TGGACAAAAC
GAGGAAATTA TTCAATTGGC CGCAACCGCT TTAAACAGTG GGGTTAGCCA AGGAAGCCAT
TCAGAATGGA AGAATAATCT GGAAAGTTTC TCTCGTCAGA AGCCTGAGCT TTTGTACCGG
GGAAAAGCAG GTGAAGAGAT AAGCAATTTA CACTGGTCGC CGGTAGGAAA TAACCTGGCT
TTTATAGTCA GGAAAGAAAA TCAAGACAGT GTTATTATAC TGGATCAGGA GAAAAAAATT
CATAATAGGG GTGAAGGCTC GGAGCTTACC TGGTCACCGG ATGGATCCGC TTTGGTAGTC
GAAAGAAAAA AGGATACTTC TCAACTTTTG ATTATTGGTC CGGACGGCCA GGAAGTAACT
TTAACCAAAG GTGAAAACCC GGTTTGGGGC CAGCAAGGAT ATTTGGTATA TACCGACATG
AAGTCACAGG AGAGGATACT AACTTATATG CCTGATGGTG AACCTCAATT TACGGTAGAG
CAGAAGGTGG GAGAAATTCG CTCTTTATAT TTAGGTAAAA ATGGCATAGT TTCGCTTAAG
AAGGTTCAAG AAAAGAAACT GGCCGAGCAG AGTAATCTTT TAATTAATAT AAATAATCAA
GGTTCCCTGA CTGAACTAAA ATGGCTCAGG GATTTGGCTG AAAATGGCGT TAAAGATCCA
AGGGTTTTAA TGCTGGATGA TATAGAGAAA AACATCAGCC AGTGTTTTGG CCCTCAGGGT
AAAACCCTAT ATTTAACTCG TACTGAAGGC GAAACAGTTT CAATTATGAG AGCTGATCTG
AGAGAAAGCT TATAA
 
Protein sequence
MRDKEDYKQQ SDNVLPMEKW RQEKTTVSGD SVSLLLEHMR MVRQSVPVND RLKEELRQKM 
FPKAAESQSV EPGPENIKEQ QSESKTGFRK KLKWYGIPAI LAILLCIIWF GQAGGYSKLE
TVGDLQEVAR YWSDKEDLQP AVSPDGKKLL LTRSGLLLML DQDGTQRVLL QPQINEKYTY
PSWTSDGNKI TLVKKINGQN EEIIQLAATA LNSGVSQGSH SEWKNNLESF SRQKPELLYR
GKAGEEISNL HWSPVGNNLA FIVRKENQDS VIILDQEKKI HNRGEGSELT WSPDGSALVV
ERKKDTSQLL IIGPDGQEVT LTKGENPVWG QQGYLVYTDM KSQERILTYM PDGEPQFTVE
QKVGEIRSLY LGKNGIVSLK KVQEKKLAEQ SNLLININNQ GSLTELKWLR DLAENGVKDP
RVLMLDDIEK NISQCFGPQG KTLYLTRTEG ETVSIMRADL RESL