Gene Dtox_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1560 
Symbol 
ID8428522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1631371 
End bp1631886 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content40% 
IMG OID645033894 
ProductRubrerythrin 
Protein accessionYP_003191045 
Protein GI258514823 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.558156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGCC AATGCGGTTG TCAAAATAAC GCAACACACA AAGCTGAAAG GCCTAGTGTT 
GAAACAATTA TTGATATGGC GGTAAGAATT GAAAAAGCCG GTCAAAAATT CTATAGTACC
CTGGCTATTT ATGAGTACAA TGAAAAAATT AAAGACCTTT TAATTTTCCT GGCGGGGGAG
GAAGCCAAAC ACGTTAAAGT CTTTGAAAAC CTAAGCAATA TATTGAAAAA CGATTTGCTT
GATGCTGATT CCTACAGCAA TGACTATCTG GATTATTTAA ATTGCATCGC CAGAACTCAC
CTGCTTTTCA ATATCGACAT TGAAGATGCT GATTTTAAGG TTGACACCGC TAGAGAAACT
CTTGAACTGG CATTGAAGTT CGAACGTGAT TCCATCACGG TATTCCAGGA GATGTTAGAA
GTGGTGGGTA AGAATGGCAA GGAAGTGCTG AAAAAACTTA TTGAACAGGA GCGGGAACAC
GTTCTCAAAC TAGCCCACTC CTTCGACATG GTCTAA
 
Protein sequence
MGCQCGCQNN ATHKAERPSV ETIIDMAVRI EKAGQKFYST LAIYEYNEKI KDLLIFLAGE 
EAKHVKVFEN LSNILKNDLL DADSYSNDYL DYLNCIARTH LLFNIDIEDA DFKVDTARET
LELALKFERD SITVFQEMLE VVGKNGKEVL KKLIEQEREH VLKLAHSFDM V