| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1444 |
|---|
| Symbol | |
|---|
| ID | 8428399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1498948 |
|---|
| End bp | 1501623 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 645033778 |
|---|
| Product | SNF2-related protein |
|---|
| Protein accession | YP_003190936 |
|---|
| Protein GI | 258514714 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.629941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGATT TAATTATTAA GATAAATTTA AAAGAGTCCA CAGAGCAATA CTGCCTTGTT
GAGACATATC TTGGCCAGTT AAAGGTCCTG AAAAAGCGGA CATTTTCAGG ACCTCTTAAG
GCAGTTGATG TCTTGTTGGT TGATTGTGTA AAGAATCTAT CTGATGATTT GTTGGAAGAA
ATAAAGGATT TCCTCCGTGA TGAGTCGCGA CAAATTAAAA AGAATAAATA CCTGCTTTCA
TTTTCGCATT TTATAAAATT TCTTTCATTA TTGGACAATG TCAGAGGGAT CTTTTGCACG
TCTTACGATA GATCTCTATA TGAATTGGAC GGTCTGAATA AGGCCGAATT CAAAATAGCT
GCCGGCGATA CTTCAAATTT TCGGGGGCGG CTCTATCTCG AAATTTCTGG TGGAGAACAC
ATCTATCTTA ACAAAAAAAG CTATTGTTTT AATGTTTTCG GGGAAACATT CATTTTTACA
CGTAATCATC TTTTTATTAT TAACCAAAGT GTGAACGTTC CTATATTGAA AGAGCTTCTC
ACGTCAAAGC GAAGCATACT ATCAGAATCC GATCTAAACC GGCTCCATAA TACGAAAGAA
TCAGGAAACA CGGAAAAAGT AATCGCGGAT CTGCATCCAG TTCCAGTTTT GTATGTTATG
TTTGCTGGTG CAAAGGTTTC CGGAAAACTT TTCTTTTCCT ATAATGGATA TGAGGTGCCA
TGGAATTCAT CTGAGGAACA TCTTAACGAT GAACGAAACG GTACCGTTTA TCTGCGCAGT
TTAATAGACG AGAGGCGTGC TTTGTCGCAG ATAAGAACTG CTGGATGGAA ACAAACAGCG
GGCAATAGCT TTATTTTGGG AAATGGTGTG TCTGCAGAGA GAAGCTTGTC GACACTATTA
GAAAGCCATT TTGAAATCAT GACATTTGAG CATAAAAAAA TTTGTTCCTC CAAAAGCGCC
AGCTTTAACA TATCATATGG ATTGGATTGG TTTGAATTAA CAGCAACTGC TGCGGGGAAG
GAAGACAAGC GCGACCTGAC ACATCTAATT GATCTGAAAT CTCGCAAACG TTATATTGAA
CTGGATAATG AAATGATCCT TTTACCAGAT GCAATTTGGG AAAATAGGAA AATATTTAAT
GAAATTGGTA GCAAATTAAA AGTCGCTAAA AATCATATCG GTCAGATTTT TGAAATTTTG
GAGCAGCCGG GTGTCACTTC AACATTTTCT CCGGATGAAA TTATTGATTT TGAAAACATC
CATCTGCTGC TACCATCCAA GCTGGATGAA ATTTTGCGGC CATATCAGAA AGACGGTGTC
CGATGGTTAT TATACATGTA CCGGAATAAC TTTGGCGGAT GTTTAGCCGA TGATATGGGG
TTGGGGAAAA CAATTCAGGC CATTGCTTTT GTTATGTCCC GATATTGGGA AGGGAAGCAG
CCAATGCGTG TATTAGTTGT TGTCCCCAAG ACTTTGATTG AGAACTGGAG AGCGGAATTT
AAAAAATTCG GAGGGACTAT ATGCGTTTGT ATCTATCATG GCACAAACAG AGAGAAGGCT
TTCAAGAAAT TTGAACAAAT CGGTGGGGTA TTGCTAACCA CCTATAACAC ACTTTTGAAC
GATATCGGGA TTTTGAATAT GATATCCTTT CATTGTATGT TCATAGATGA GGCGCAGTAT
ATAAAAAACT ATAAGGCAAA AACATATGTG GCGGCTCAAA AAATTAAAGC ACGGTCAAAA
TTCATCTTGT CAGGGACACC TTTTGAAAAT AACATTGGTG AACTATGGGC CTTGATAGAT
TTAATAAATC CGGGGTATTT AGGCAATCGC ACCGCATTTA TAAAGAGATA TATTAACCTA
TCATCAGACA AATTAATTGC AAAACGTCTA AATGCCAGAA TTAAGCCATT TGTTTTGCGG
CGGCTGAAAA AAGACGTCCT GAAAGAGCTA CCGGAAAAAA CAGAGCTTAA AGTGATATGC
GATATGGCTG ATACGCAGCG AGAACTATAT GAAAGCATTC TCATATCCGT AAAGAATGAA
ATAGCGCGTA TGCCGAACCG TTTTGAAATC AAAGATGCAT CTACTGTTTT AGAGGGGTTG
CTGTACCTGA GGCAAGTATG TTGCCATCCT GCGCTATTGA AAAGAACGCT CAACTGGAAT
CATTGTGATG AATCAGGTAA GTTTGATTTG TTTAAGTTAA AAATAGATGA ATTGCAGGCC
AACCATGAAA AGGTTGTTGT ATTTAGCCAG TTTACATCCA TGCTTAGCAT TATGAAAAAA
TGGGCGGAAG AGCAAGGATA TGCTACATTT TATTTAGACG GAGCCACAAT GAAACGACAG
GAGGTTGTTG ACAGCTTTGA GCGTTCGGAT GAGGGAGTTT TCTTTATCAG CTTGAAGGCG
GGTGGCGTTG GGCTTAATAT TGTATCATGC CAATACGCGA TTATTTATGA CCCCTGGTGG
AATCCGGCTG TTGAAAATCA GGCATCTGAT AGAATTTATC GCATCGGACA GAAAAAAAAC
GTATTTGTTT ACCATCTGGT CACGGCAAAC TCTATCGAGG AAAAAATCGA GAAACTGAAA
ACCGAGAAGA GAGAAATTGC CGACAATCTC CTGCTCGACA CTAGTATATC AGGCATACTA
TCAATTAAGG AATTAAAAAG GCTGATTGTG GAATAG
|
|---|
| Protein sequence | MNDLIIKINL KESTEQYCLV ETYLGQLKVL KKRTFSGPLK AVDVLLVDCV KNLSDDLLEE
IKDFLRDESR QIKKNKYLLS FSHFIKFLSL LDNVRGIFCT SYDRSLYELD GLNKAEFKIA
AGDTSNFRGR LYLEISGGEH IYLNKKSYCF NVFGETFIFT RNHLFIINQS VNVPILKELL
TSKRSILSES DLNRLHNTKE SGNTEKVIAD LHPVPVLYVM FAGAKVSGKL FFSYNGYEVP
WNSSEEHLND ERNGTVYLRS LIDERRALSQ IRTAGWKQTA GNSFILGNGV SAERSLSTLL
ESHFEIMTFE HKKICSSKSA SFNISYGLDW FELTATAAGK EDKRDLTHLI DLKSRKRYIE
LDNEMILLPD AIWENRKIFN EIGSKLKVAK NHIGQIFEIL EQPGVTSTFS PDEIIDFENI
HLLLPSKLDE ILRPYQKDGV RWLLYMYRNN FGGCLADDMG LGKTIQAIAF VMSRYWEGKQ
PMRVLVVVPK TLIENWRAEF KKFGGTICVC IYHGTNREKA FKKFEQIGGV LLTTYNTLLN
DIGILNMISF HCMFIDEAQY IKNYKAKTYV AAQKIKARSK FILSGTPFEN NIGELWALID
LINPGYLGNR TAFIKRYINL SSDKLIAKRL NARIKPFVLR RLKKDVLKEL PEKTELKVIC
DMADTQRELY ESILISVKNE IARMPNRFEI KDASTVLEGL LYLRQVCCHP ALLKRTLNWN
HCDESGKFDL FKLKIDELQA NHEKVVVFSQ FTSMLSIMKK WAEEQGYATF YLDGATMKRQ
EVVDSFERSD EGVFFISLKA GGVGLNIVSC QYAIIYDPWW NPAVENQASD RIYRIGQKKN
VFVYHLVTAN SIEEKIEKLK TEKREIADNL LLDTSISGIL SIKELKRLIV E
|
|---|
| |