Gene Dtox_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1419 
Symbol 
ID8428371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1461394 
End bp1463514 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content53% 
IMG OID645033756 
ProductUvrD/REP helicase 
Protein accessionYP_003190917 
Protein GI258514695 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAATC GTATAACTGT AGCCATTGCT GCGGATTTTT TAAGCTGTTT TTCTCGTATT 
CCACGCAAAG AACAAGATAA AGTGGCCGAG TTTATTAATA AATTTCGCAC TAATCCCACT
TCTTCCGGCA TTAACTATGA GAAAATCAAG GGAGCCAGGG ATCCTGACTT TCGATCAGTG
CGGATCAGTG GTTCCTACCG GGGAATTATT AAAAAGCCGG AGCAGGGGAA TGTCTATTTG
CTGCTCTGGG TGGATACGCA TGATGAAGCT TATGCCTGGG CTGAGCGTAA GAAATGCAAG
ATTAACCCGG AAACAGGAAG TATTCAGGTC TATGATGTCT GGGACAGCCC GCAGGAGACC
GGTCAGGCAG CGGGGGAAGT CCGGCAGCCC GGACTGTTTT CCGGCATCAG CGACCGCCAC
CTGCTGAAAC TGGGTGTTCC CAAAGAGTTG CTGCCGCTGG TAAAGTCCCT GCGTAATGGT
GAGGAACTGG AGGAAACTGC GGGCAGGTTG CCCCAGGAGG CTTTTGAGGC CCTCTTTTTC
CTGTCCTGCG GTTATTCTCT GGAGGAAGTC CTGCAAAGCC AGGAAACAGA GGCGGACAAG
CAGGTGGACG AAAACGATTT TCTGGCGGCA CTGGCTGATT TGAATTCTCA ACGCCGCTTT
ATGGTAGTGG AAGAGGATGA GGAATTGCAC GCCATGTTGA AGGCGCCTCT GGAAAAGTGG
CGCGTGTTTC TCCATCCTGC CCAGCGCAAG CTGGTGGAGC AGAACTGGAA CGGCCCGGTT
CGTGTGCTCG GTGGGGCGGG TACGGGAAAG ACTGTGGCAG CGATTCACCG GGCTCGCTAT
CTGGCGGAAA ATGTGTATAC GGGGAGTAAA GATCGCATTC TGTTCACCAC TTTTACCCGC
AACCTGGCGG CGGATATAAA AGATCAACTG CGCAGGATCT GTTCACCCGG GACAATGGCC
AGGATTGAGG TTGTCAATCT GGACCGCTGG GTGGCTGGTT TTTTGAAGCA AAACGGTATT
GCAGCCACAC TTCTGGTTAA CGGCGAGGAA GCAAGATCAT ACTGGAGGAA GGCTCTGACA
ATGGCTCCGG TTGAGCTTGG TTTTTCGGAT GAGTTCTACC TGGAAGAATG GGAGAGTGTG
ATTCAACCCC AGGAAGTTAG CAGTAGGGAA GAATACTTGA AGGCTTCCCG GCTGGGACGG
GGAACCCGTG TTGATCGCAA GGTGAGAGCC GCCATCTGGC CGGTATTTGA GGAGTATCGT
TTGCTGCTAC AGTCGGCGGG CAAGCGGGAA CCGGCAGATG CGATGAGGGA CGCACGTATT
CTCATCGAAA GAGGGTATCA GATCCCGGAA TATAAGGCTG TCATTGTGGA TGAGGCTCAG
GATATGAGTG TGCAGGCAAT GCGGCTGCTC AGGGCGGTTG CCGGGGAGGA GAGGGAGAAC
GACTTATTCA TAGTGGGTGA TGCACACCAG CGCATCTACC GGCACAAGGT TGTTTTGTCC
AAGTGCGGGA TTAATGTTCG GGGCCGGAGT AGAAAGCTGC GCATAAATTA CCGGACGACT
GATGAGATTC GCAAGTGGTC GGTGGCGATT CTTAATGATC TGCCGATCGA TGATCTGGAC
GGGGAATTGG ATGACCAGAA GGGTTACAAG TCTCTGCTGC ACGGCCATCC TCCGGTTATC
CGGGTGTTTG CCTCAGAGGA TGAGGAGATT GGATTTATCG TTAATTATCT TCAGCATTTG
GGGCAGGAGA ACTGGCGCGA CACCTGCCTG GTAGTCAGGA CGGGCAAGCT GCTGGAGGCT
TATAAGGGTT TGCTTGAAGC TGCGGGACTT CCGGTATTTC AGATCAACCC GCATAATTCC
GATGATAGGG CAGCGGAAGG CATCCGGCTT GCTACTATGC ACCGGGTCAA GGGGTTGGAA
TTTGAGTTTA TGATCCTTGC TTCGGTTAAT GATAATGTGG TGCCGCTGCC TGTGAGCGGT
GCGGTATCGG GTGATCAGGT GGTCAGGGAA GAACATGAAA TCAGGGAGCG GGCACTGCTT
TATGTGGCGG CGACTAGGGC TAAGAGAGAG GTTGTGATTA CCTGCTGCGG GAAGCCCAGC
CCCTTTATCT TGTTAATATA A
 
Protein sequence
MSNRITVAIA ADFLSCFSRI PRKEQDKVAE FINKFRTNPT SSGINYEKIK GARDPDFRSV 
RISGSYRGII KKPEQGNVYL LLWVDTHDEA YAWAERKKCK INPETGSIQV YDVWDSPQET
GQAAGEVRQP GLFSGISDRH LLKLGVPKEL LPLVKSLRNG EELEETAGRL PQEAFEALFF
LSCGYSLEEV LQSQETEADK QVDENDFLAA LADLNSQRRF MVVEEDEELH AMLKAPLEKW
RVFLHPAQRK LVEQNWNGPV RVLGGAGTGK TVAAIHRARY LAENVYTGSK DRILFTTFTR
NLAADIKDQL RRICSPGTMA RIEVVNLDRW VAGFLKQNGI AATLLVNGEE ARSYWRKALT
MAPVELGFSD EFYLEEWESV IQPQEVSSRE EYLKASRLGR GTRVDRKVRA AIWPVFEEYR
LLLQSAGKRE PADAMRDARI LIERGYQIPE YKAVIVDEAQ DMSVQAMRLL RAVAGEEREN
DLFIVGDAHQ RIYRHKVVLS KCGINVRGRS RKLRINYRTT DEIRKWSVAI LNDLPIDDLD
GELDDQKGYK SLLHGHPPVI RVFASEDEEI GFIVNYLQHL GQENWRDTCL VVRTGKLLEA
YKGLLEAAGL PVFQINPHNS DDRAAEGIRL ATMHRVKGLE FEFMILASVN DNVVPLPVSG
AVSGDQVVRE EHEIRERALL YVAATRAKRE VVITCCGKPS PFILLI