Gene Dtox_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1190 
Symbol 
ID8428129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1212947 
End bp1213459 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID645033524 
Productintracellular protease, PfpI family 
Protein accessionYP_003190698 
Protein GI258514476 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.311369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0141697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG AAATAGCCTT ATTGGTAGAA GATAATTACA ATGAATTAGA ATTCTGGTAT 
CCATACTTCC GTTTTCAAGA GGCCGGTTTT CAGGTGAATA TAATAGGATC AGGACGTAAG
CAATCTTATC TTGGAAAAAG CGGCGCTATG CCGGTAGCTG AGGATTTCTC CGCTGATAAA
GTCAAAGCAG AGCAATTTAC GGCAGTTATT GTTCCTGGTG GCTATGCTCC TGATTTAATG
CGTTTGAGTG AACCAATGAT TACTCTTGTG AGGGAAGCCT ACGAGCAGGG TAAAGTGGTG
GCTTCAATTT GCCATGGTGC CTGGATGCTT ATATCAGCAG GCATTATCAA GGGTAAGAAA
GCGACCTGCT GTCCTCATAT TAAGGACGAC GTAAAAAATG CTGGTGCCGA GTACATAAAT
GAAGAAGTAA TCGTTGACGG CAAAGTTGTA ACCTCTAGGA TACCCGATGA TCTGCCAGCT
TTTTGTAAAG CCATATTGTC TTTGTTGGGG TAA
 
Protein sequence
MSKEIALLVE DNYNELEFWY PYFRFQEAGF QVNIIGSGRK QSYLGKSGAM PVAEDFSADK 
VKAEQFTAVI VPGGYAPDLM RLSEPMITLV REAYEQGKVV ASICHGAWML ISAGIIKGKK
ATCCPHIKDD VKNAGAEYIN EEVIVDGKVV TSRIPDDLPA FCKAILSLLG