Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1128 |
Symbol | |
ID | 8428067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1156493 |
End bp | 1157260 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645033463 |
Product | putative RNA polymerase sigma factor SigI |
Protein accession | YP_003190637 |
Protein GI | 258514415 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.552744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGCTGT ATATAGAGGA TGCGGAAGTA TTGAAACATA AACTATATAG AGCCAAGGCA GGAGATAATG AAGTAAGAGA AGATTTTTTA AGCAGCTGCA AACCTTTTAT CGGTAAAGTT GTGAGTAAAA TATGCCGCCG GGTTTTATCA TGGGGACAGG ATGATGAACT AAGTATAGGT TTGATTGCTA TGAATGAAGC TATTGACAAG TATAAGGAAA ACTACCGGGT GCCATTTTTT GCTTTTGCCA GGATGGTTAT TAAGGGAAGA TTGATTGACT ATTTTAGGCT GGAAAATAGG TATGCCATGT CTAATCTGCT TCATTCCTTC GGAGAAACCG GTGAGCAATG TTGTTTTGAG ATTATAAGGT CCTGGGAACA ATATCTAATA ACGGAAACAA CAAGCGAGCG GAGAGGTGAA TTGGAACAAT ATGAAAAAAA ACTCGAGCAG TATAAAATAT CTCTGGATAA TTTAATCAAA TCTTCTCCCA AGCACTTTGA CAGCAGGGCG TTATTGCTGA AAACAGCTAA TACCCTGGCC TCGAATAACG AATTAATGCA TTATTTGCAA AAAAATAAGA GACTGCCTCT GATGCAATTA ATCAGTCTAA CCGGAATCAG CCGCAAAACC TTAGAAAGAG GGAGAAAATA CATTATAGCT GCGGCCATCA TATTATACCA CAGGAGTGAG TTTGTTTGTC TTAATTGGTA TTTAAGGAGA ATATCCCGTA TAGGCATGAA TCTGAAAAAG CAGGATACAG TTTGTTAG
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Protein sequence | MLLYIEDAEV LKHKLYRAKA GDNEVREDFL SSCKPFIGKV VSKICRRVLS WGQDDELSIG LIAMNEAIDK YKENYRVPFF AFARMVIKGR LIDYFRLENR YAMSNLLHSF GETGEQCCFE IIRSWEQYLI TETTSERRGE LEQYEKKLEQ YKISLDNLIK SSPKHFDSRA LLLKTANTLA SNNELMHYLQ KNKRLPLMQL ISLTGISRKT LERGRKYIIA AAIILYHRSE FVCLNWYLRR ISRIGMNLKK QDTVC
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