Gene Dtox_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1128 
Symbol 
ID8428067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1156493 
End bp1157260 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content38% 
IMG OID645033463 
Productputative RNA polymerase sigma factor SigI 
Protein accessionYP_003190637 
Protein GI258514415 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02895] RNA polymerase sigma-I factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.552744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCTGT ATATAGAGGA TGCGGAAGTA TTGAAACATA AACTATATAG AGCCAAGGCA 
GGAGATAATG AAGTAAGAGA AGATTTTTTA AGCAGCTGCA AACCTTTTAT CGGTAAAGTT
GTGAGTAAAA TATGCCGCCG GGTTTTATCA TGGGGACAGG ATGATGAACT AAGTATAGGT
TTGATTGCTA TGAATGAAGC TATTGACAAG TATAAGGAAA ACTACCGGGT GCCATTTTTT
GCTTTTGCCA GGATGGTTAT TAAGGGAAGA TTGATTGACT ATTTTAGGCT GGAAAATAGG
TATGCCATGT CTAATCTGCT TCATTCCTTC GGAGAAACCG GTGAGCAATG TTGTTTTGAG
ATTATAAGGT CCTGGGAACA ATATCTAATA ACGGAAACAA CAAGCGAGCG GAGAGGTGAA
TTGGAACAAT ATGAAAAAAA ACTCGAGCAG TATAAAATAT CTCTGGATAA TTTAATCAAA
TCTTCTCCCA AGCACTTTGA CAGCAGGGCG TTATTGCTGA AAACAGCTAA TACCCTGGCC
TCGAATAACG AATTAATGCA TTATTTGCAA AAAAATAAGA GACTGCCTCT GATGCAATTA
ATCAGTCTAA CCGGAATCAG CCGCAAAACC TTAGAAAGAG GGAGAAAATA CATTATAGCT
GCGGCCATCA TATTATACCA CAGGAGTGAG TTTGTTTGTC TTAATTGGTA TTTAAGGAGA
ATATCCCGTA TAGGCATGAA TCTGAAAAAG CAGGATACAG TTTGTTAG
 
Protein sequence
MLLYIEDAEV LKHKLYRAKA GDNEVREDFL SSCKPFIGKV VSKICRRVLS WGQDDELSIG 
LIAMNEAIDK YKENYRVPFF AFARMVIKGR LIDYFRLENR YAMSNLLHSF GETGEQCCFE
IIRSWEQYLI TETTSERRGE LEQYEKKLEQ YKISLDNLIK SSPKHFDSRA LLLKTANTLA
SNNELMHYLQ KNKRLPLMQL ISLTGISRKT LERGRKYIIA AAIILYHRSE FVCLNWYLRR
ISRIGMNLKK QDTVC