Gene Dtox_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0988 
Symbol 
ID8427927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1011301 
End bp1012728 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content51% 
IMG OID645033326 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_003190500 
Protein GI258514278 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0857891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00240363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATCAAA TATTTTTAAC TGAAAGTTTA TTAAAGATTC TCAGCCCGGA GCAGGTGCTG 
TCTGACGAAT TTGATTTAAA ATTTTATTCC TATGACAGTT CTTTTCAGGC CAAACTTAAC
CGTTATTTCC CGGACGCTGT GGTATTTCCC CGTTCTACAG AGGAAGTTGC GGCGGTTATG
CGACTGGCCT ATGAACACGG CATTCCAGTC ACACCCAGAG GCGCAGGCAC AGGGGAAACC
TGTGGCTGCC TGGCTGTCGA GGGCGGCTTG GTGATGGATT TATCCACCTG GGATACTATT
GAAGAAGTCG ATACAGCCAA TATGCAGGTT TTCGTTCGCC CCGGAGTAGT TCACGCCAAT
TTAAATAACC ATCTGGCCTC TTACGGCTTA TTTTTTCCGC CCGATCCCGG CAGCAGCCGC
ATGTGCACCG TCGGAGGCAT GGTTGCCAAC AACTCCAGCG GTTTGAGAGC AGTCAAGTAC
GGCACTACAG AGCAATACAT ACTTGGCCTG GAGGTAGTAT TGCCCAACGG TGAGGTTGTT
ATCACCGGAG GACAAAAGTC AAGAGCTATA AAAAACGTTT CCGGGCTGAA TTTAACTAAG
CTTTTCGTTG GCTCGGAAGG TATCCTGGGT ATTGTGACAA AGATAAGGCT GCGCGTCTGG
CCAAAACCCA AAAGCCGGGG ATTGGCAATG GCAGTCTTTG ACAACCTGGA ACAAGCCCCC
CAGTCAGTGC TGGATGTCTA CCAGGGCGGC ATTCTGCCCT CCGGCATTGA AATCCTGGAC
GATTCAGCCA TTAAAGCTAT TAACATGTAT AAACCGGAAA TCAACCTTCC GAATGCCGAA
GCCATCCTGC TTTTTGAAGT GGACGGAAAC CCGGCAGGTG TGGAATGGGA AGGCCAACAG
ATAAAAGAAA TCGTCTCCCG CAGGGCCGTC AGTGTTGAAT GGGCCACTGA GCCCAACAGA
ATCAACAGTC TCTGGCAAGG ACGCTCAGTG GTAGCAACCG CTGCGGCCCG TGTCCGTCCC
GACGGCAGTA GAATTTTCGC CGGAGAAGAT ATCAGTGTGC CACTAAACAG GGTTACCGAA
TGCCTGCGCC GCATCAAAGA ATTAGCTGCC CAACATGGGA TTGCTGTAGT GAACTACGGC
CATATCGGGG ACGGCAATGT CCATACTGCT CCCGTGATCA ATATGGACAA CCAGGCAGAA
GTTGAACAGG TACAAAAACT GACCGATGCC ATCCACCGCC TGGCGGTTGA ACTTGGCGGT
GCCACTACCG GAGAACACGG TGTCGGTGCG GTCAGATCCC GCTACGCTCC CGCGGAACAT
GGCAGAGCAC TTAATGTAAT GAGAATGATT AAATCTGTCT TGGATCCCAA AGGCATTATG
AATCCCGGCA AATTACTTCC CCCGGAGGGA GACGATAGCC AGTGCTAA
 
Protein sequence
MNQIFLTESL LKILSPEQVL SDEFDLKFYS YDSSFQAKLN RYFPDAVVFP RSTEEVAAVM 
RLAYEHGIPV TPRGAGTGET CGCLAVEGGL VMDLSTWDTI EEVDTANMQV FVRPGVVHAN
LNNHLASYGL FFPPDPGSSR MCTVGGMVAN NSSGLRAVKY GTTEQYILGL EVVLPNGEVV
ITGGQKSRAI KNVSGLNLTK LFVGSEGILG IVTKIRLRVW PKPKSRGLAM AVFDNLEQAP
QSVLDVYQGG ILPSGIEILD DSAIKAINMY KPEINLPNAE AILLFEVDGN PAGVEWEGQQ
IKEIVSRRAV SVEWATEPNR INSLWQGRSV VATAAARVRP DGSRIFAGED ISVPLNRVTE
CLRRIKELAA QHGIAVVNYG HIGDGNVHTA PVINMDNQAE VEQVQKLTDA IHRLAVELGG
ATTGEHGVGA VRSRYAPAEH GRALNVMRMI KSVLDPKGIM NPGKLLPPEG DDSQC