Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0988 |
Symbol | |
ID | 8427927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 1011301 |
End bp | 1012728 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645033326 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_003190500 |
Protein GI | 258514278 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0857891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00240363 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAATCAAA TATTTTTAAC TGAAAGTTTA TTAAAGATTC TCAGCCCGGA GCAGGTGCTG TCTGACGAAT TTGATTTAAA ATTTTATTCC TATGACAGTT CTTTTCAGGC CAAACTTAAC CGTTATTTCC CGGACGCTGT GGTATTTCCC CGTTCTACAG AGGAAGTTGC GGCGGTTATG CGACTGGCCT ATGAACACGG CATTCCAGTC ACACCCAGAG GCGCAGGCAC AGGGGAAACC TGTGGCTGCC TGGCTGTCGA GGGCGGCTTG GTGATGGATT TATCCACCTG GGATACTATT GAAGAAGTCG ATACAGCCAA TATGCAGGTT TTCGTTCGCC CCGGAGTAGT TCACGCCAAT TTAAATAACC ATCTGGCCTC TTACGGCTTA TTTTTTCCGC CCGATCCCGG CAGCAGCCGC ATGTGCACCG TCGGAGGCAT GGTTGCCAAC AACTCCAGCG GTTTGAGAGC AGTCAAGTAC GGCACTACAG AGCAATACAT ACTTGGCCTG GAGGTAGTAT TGCCCAACGG TGAGGTTGTT ATCACCGGAG GACAAAAGTC AAGAGCTATA AAAAACGTTT CCGGGCTGAA TTTAACTAAG CTTTTCGTTG GCTCGGAAGG TATCCTGGGT ATTGTGACAA AGATAAGGCT GCGCGTCTGG CCAAAACCCA AAAGCCGGGG ATTGGCAATG GCAGTCTTTG ACAACCTGGA ACAAGCCCCC CAGTCAGTGC TGGATGTCTA CCAGGGCGGC ATTCTGCCCT CCGGCATTGA AATCCTGGAC GATTCAGCCA TTAAAGCTAT TAACATGTAT AAACCGGAAA TCAACCTTCC GAATGCCGAA GCCATCCTGC TTTTTGAAGT GGACGGAAAC CCGGCAGGTG TGGAATGGGA AGGCCAACAG ATAAAAGAAA TCGTCTCCCG CAGGGCCGTC AGTGTTGAAT GGGCCACTGA GCCCAACAGA ATCAACAGTC TCTGGCAAGG ACGCTCAGTG GTAGCAACCG CTGCGGCCCG TGTCCGTCCC GACGGCAGTA GAATTTTCGC CGGAGAAGAT ATCAGTGTGC CACTAAACAG GGTTACCGAA TGCCTGCGCC GCATCAAAGA ATTAGCTGCC CAACATGGGA TTGCTGTAGT GAACTACGGC CATATCGGGG ACGGCAATGT CCATACTGCT CCCGTGATCA ATATGGACAA CCAGGCAGAA GTTGAACAGG TACAAAAACT GACCGATGCC ATCCACCGCC TGGCGGTTGA ACTTGGCGGT GCCACTACCG GAGAACACGG TGTCGGTGCG GTCAGATCCC GCTACGCTCC CGCGGAACAT GGCAGAGCAC TTAATGTAAT GAGAATGATT AAATCTGTCT TGGATCCCAA AGGCATTATG AATCCCGGCA AATTACTTCC CCCGGAGGGA GACGATAGCC AGTGCTAA
|
Protein sequence | MNQIFLTESL LKILSPEQVL SDEFDLKFYS YDSSFQAKLN RYFPDAVVFP RSTEEVAAVM RLAYEHGIPV TPRGAGTGET CGCLAVEGGL VMDLSTWDTI EEVDTANMQV FVRPGVVHAN LNNHLASYGL FFPPDPGSSR MCTVGGMVAN NSSGLRAVKY GTTEQYILGL EVVLPNGEVV ITGGQKSRAI KNVSGLNLTK LFVGSEGILG IVTKIRLRVW PKPKSRGLAM AVFDNLEQAP QSVLDVYQGG ILPSGIEILD DSAIKAINMY KPEINLPNAE AILLFEVDGN PAGVEWEGQQ IKEIVSRRAV SVEWATEPNR INSLWQGRSV VATAAARVRP DGSRIFAGED ISVPLNRVTE CLRRIKELAA QHGIAVVNYG HIGDGNVHTA PVINMDNQAE VEQVQKLTDA IHRLAVELGG ATTGEHGVGA VRSRYAPAEH GRALNVMRMI KSVLDPKGIM NPGKLLPPEG DDSQC
|
| |