| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0552 |
|---|
| Symbol | |
|---|
| ID | 8427487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 567493 |
|---|
| End bp | 568227 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645032917 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003190095 |
|---|
| Protein GI | 258513873 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAT TGAGAGCCGT GCTTTGGAGA GAGTATCTTT TTTTTAAACG CCGCTGGTGG
ACTATTACCA CCGGTTCAAT GGTAGCACCT TTGCTGTACA TGGTAGCCTT CGGCTGGGGC
CTGGGCAAAA CAGTTAACCT GGGAGGGGTG GCCTACATCG ACTTTATCGT ACCTGGAATA
GTGGCGCTAA GTACAATGAA CGTCAGTTTC AACGCCGTGG CCACTCCTCT TTCCATTGCC
CGCCTCTACG ATAAGACACT GGAGGAATAT CTTGTCGCGC CTATCACTGT CTATTCCTTT
GCGGCAGGTA AAATTCTGGC GGGAGCGCTC AGGGGATTGT ATGCCGCAGC TATTTTACTG
GTCATATCCT GGTTTTTCCG GGCAGACCTT ATCTTCAATC TCTGGTTTGT TCTTCTTTTG
TGCTTGAACT GCCTGGTCTT CTCAAGCCTG GGATTTCTGG TGGCTCTGAA AATCAAATCT
CATCCGGACA TGACCAGGTT TAATAATTTT GTCATAACCC CGATGACTTT TGTCTGCGGC
ACTTTTTTTT CGGTAGACAG GGTACCCTTT CCTTTTTCAC AGATTATAAA ATTATTACCA
CTGACCCCGG CCAGCCACGG ACTTCGATCG GTCGCACTGG GAACTGATCT GCCGTGGACT
GAACCGGCAA TTCAAATATT CTATTTAGCT CTTTTTGTTA TATGGGGAAT TAAGACCTGC
CTCAAAGTGG AATAG
|
|---|
| Protein sequence | MSGLRAVLWR EYLFFKRRWW TITTGSMVAP LLYMVAFGWG LGKTVNLGGV AYIDFIVPGI
VALSTMNVSF NAVATPLSIA RLYDKTLEEY LVAPITVYSF AAGKILAGAL RGLYAAAILL
VISWFFRADL IFNLWFVLLL CLNCLVFSSL GFLVALKIKS HPDMTRFNNF VITPMTFVCG
TFFSVDRVPF PFSQIIKLLP LTPASHGLRS VALGTDLPWT EPAIQIFYLA LFVIWGIKTC
LKVE
|
|---|
| |