| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0354 |
|---|
| Symbol | |
|---|
| ID | 8427289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 369057 |
|---|
| End bp | 370814 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645032752 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003189930 |
|---|
| Protein GI | 258513708 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.667911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATACTA TACTGGCAAA ACTAAATCTC ACAGGTTTTG CAAGGCTGCT TCTATATCTC
CGTCCTTATT GGAAAGGGAT GGCTATAGCC ATAAGCAGCG GCACCCTGCA TCATTTATTT
GCCATAGCCG GCGCTACCCT AGCTGCCTAT CTGGTGGGGC TAACTGCCAT GGGAGGGGGG
AAGGAGCAGA TTTTGTCACT TTTGCCCGCG CTGGTTTTAC TCATTAGCCT GCGAGTGGTA
ATGTATTTTT CAGATATGTG GTTTGCCCAT GAGGTTGCTT TTCGGATTTT GGTGGAGTTC
AGGATTAAGA TATATCAGTC GGTGGAGCGG GTGTCCCCGG CCTATCTGTT GAACCGGCGT
TCCGGCGAGC TGGCGTCCAC ACTCATGGCT GATATTGAAG TATTGGAGTG GTTTTTCGCC
CACACTGCGG GGACTTTTCT GGTGGCGCTG TTGGTTTCCC TGATCACCTT AGGCTTACTG
GGGTGCATCA ATTGGTTGCT TCCTCTAGTA GTCACTCCCT GGATTATTCT ATTGTTCAGC
GTACCTTTTT GGTTCAGCCG GAAAGCTGAC CGGCAGGGTA AGGACACCAG AGAAAAGCTG
GCCGATATTA ATTGCGAGGC AGTGGACGGA GTGCAGGGGC TGCGGGAGAT TATCTCTTTC
AACTATGAGC GGGGTTTTTT AGACAGATTA AGGCTCTACT CGGATCGGTT GGGGCAAAGT
CTGTACTTCT ACGGCAGGAG ACTGGGTTTT GAGGGGGCGT TGCTAAATAT TTTTTCCTCC
CTTACAATTA TTTGTGTTTT GGGGGTTTCC GCTTATCTGA TTGTCAGCGG TCAGATGGAT
TTTAGCTGGC TCCCTGTGAC CGTAATACTG TCTGCCAATA TGCTCACCCC TGTCCTGGAG
ATATCGTCCA TGGCCAGAAA TTTCGGGATT ATACTGGCGG CAGCGGAGAG GGTATATACG
GTGCTTGAGG CCAAAGAAAC AGTGCAGGAC GGAGCAGTTA GTTTGCCCGA AGGCACCATA
AAGCCTCAAA TATGTTTCAA CAATGTGTCG TTTCGCTACA GGGAAGACCT GCCTAACGTG
CTTAATGATA TAAGTTTTTC TGTGGGAGAA GGGGAAACGG TAGCTCTGGT GGGCCATTCA
GGGGTAGGCA AGACTACATG TATCAATTTG CTGCAAAGGT TCTGGGATGT GAACAGGGGG
CAGATTGCAT TTGGAAGTAT GGCAATAAAG GAATTGCCTT TGGATTACCT GCGCAGTTTG
ATTACTATGG TGCCTCAAGA TATTTATCTT TTCAACACCT CTATTCTGGA AAATATAAAG
TTGGGCAAGC AGGGGGCTTC CAGGGAAGAA GTCAAGGCGG CTGCCAAGGC TGCTTACATA
CATGATTTTA TAGCCGGTTT GCCGGAGGGT TACGATACAA TTGCCGGGGA GAGGGGAGTA
AAGATGTCCG GGGGCCAGAA GCAGAGAATC GCTATTGCCA GAGCAATGCT GAAGAATTCT
CCTATATTGA TTTTGGACGA AGCACTTTCA AGCCTGGACA CGGAAAACGA AAGATTATTA
CAGGAATCAA TCAAAAATTT GCGCCGGGGA CGAACCACCC TTATCGTAGC CCACAGGCTT
TCCACCTTTC GTGACGCTGA CAAGTTAGTG GTTTTAAAAA ATGGTAAAGT AATTGAAATC
GGCAGTCACG CGGAGCTTAT GGAAAAAAGA GGATACTATG GTGAATTTGT CTCTTCTCAA
GTTGCTGTTT CCGGATAA
|
|---|
| Protein sequence | MNTILAKLNL TGFARLLLYL RPYWKGMAIA ISSGTLHHLF AIAGATLAAY LVGLTAMGGG
KEQILSLLPA LVLLISLRVV MYFSDMWFAH EVAFRILVEF RIKIYQSVER VSPAYLLNRR
SGELASTLMA DIEVLEWFFA HTAGTFLVAL LVSLITLGLL GCINWLLPLV VTPWIILLFS
VPFWFSRKAD RQGKDTREKL ADINCEAVDG VQGLREIISF NYERGFLDRL RLYSDRLGQS
LYFYGRRLGF EGALLNIFSS LTIICVLGVS AYLIVSGQMD FSWLPVTVIL SANMLTPVLE
ISSMARNFGI ILAAAERVYT VLEAKETVQD GAVSLPEGTI KPQICFNNVS FRYREDLPNV
LNDISFSVGE GETVALVGHS GVGKTTCINL LQRFWDVNRG QIAFGSMAIK ELPLDYLRSL
ITMVPQDIYL FNTSILENIK LGKQGASREE VKAAAKAAYI HDFIAGLPEG YDTIAGERGV
KMSGGQKQRI AIARAMLKNS PILILDEALS SLDTENERLL QESIKNLRRG RTTLIVAHRL
STFRDADKLV VLKNGKVIEI GSHAELMEKR GYYGEFVSSQ VAVSG
|
|---|
| |