Gene Dtox_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0323 
Symbol 
ID8427258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp332977 
End bp333798 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content44% 
IMG OID645032721 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003189899 
Protein GI258513677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.147172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATG CAACAATATT TACAACAGCA CTATTGGTGG GTTTTTCCGG AGCTATCATG 
CCGGGTCCTT TGTTGACTGT AACTATTATG CAAACAGTTG TTAAAGGATT TAAAGCCGGG
CTGCTGATTG TGTTGGGCCA TGCTATACTG GAAGCTTTGC TGGTTGCCGC TTTAGTTTTG
GGATTAGCCT CTTTCTTGGT TCAATCAGAA GTAAAGTCTC TTATTGCAGT AGTCGGTGGG
GTGTTTTTAA TATATCTGGG TTTTAGTATG GCCCGCTCTT CTCGCGTCAG CTTTAATGCT
GTAAACCCGT CACTAAAAAT AGAAAACATT TGGCAGCAAA ATGTTGCCGG TGAATATGAC
AAGCAATGCA AACTAAGAAA TGAGCATTAT GAAGAATCTT TACCATCTAA CAATGGCGGT
CCTGAGAAGG AGCGACTGAG TCATCATGAT AGCCGGTATA ACTCTGAGAC ATCATTTAGC
GGGAATATAA AAGCAGGTGG TCTCCACGGT GTCTCAATGC ATCCTGTGCT TGCCGGGATA
CTGGTATCAT TGTCCAACCC GTATTGGTCT ATCTGGTGGG CCACACTGGG ATTAAGTTAT
ATTACACTGG CCCTGGAAAA TGGAACAGCC GGCCTGCTTT CTTTCTTCAG CGGTCATATA
CTGGCGGATT TTATCTGGTA TGCACTGGTC GCAGCAGCTG TTGCCGGGAG TCGAAACTTT
ATAAAACCTG CAATATATAG GGTTATAGTT CTGATCTGTG CTGTATTTCT TGTTGTTCTG
GGAGGCTATT TTATACACAG TGGAATATGG GTGCATGTCT AA
 
Protein sequence
MDNATIFTTA LLVGFSGAIM PGPLLTVTIM QTVVKGFKAG LLIVLGHAIL EALLVAALVL 
GLASFLVQSE VKSLIAVVGG VFLIYLGFSM ARSSRVSFNA VNPSLKIENI WQQNVAGEYD
KQCKLRNEHY EESLPSNNGG PEKERLSHHD SRYNSETSFS GNIKAGGLHG VSMHPVLAGI
LVSLSNPYWS IWWATLGLSY ITLALENGTA GLLSFFSGHI LADFIWYALV AAAVAGSRNF
IKPAIYRVIV LICAVFLVVL GGYFIHSGIW VHV