| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0247 |
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| Symbol | |
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| ID | 8427171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 265628 |
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| End bp | 266596 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645032634 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003189823 |
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| Protein GI | 258513601 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0897176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.676091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGAA TAGGCAATGT TACAATAAAA AACAGAGTAA TCTCTGCCCC AATGGCAGGC
ATTACTGACA GGGCATATCG TATTCTAGCT AAAGAGGCTG GTTGTGGCTT AGTCTGTACG
GAAATGATCA GTGATCAGGC TTTATTATAT GGCAACCCTA AAACTAATAT ATTATTAGAC
TGTACAGGAG AAACCCCGCC CATCAGTATG CAGATTTTTG GCTCCAGTCC TGAATATATG
GCACGCGCCG CCAGTATAAC AGAAGCACGG GGGGCCAGTA TTATTGATAT AAATATGGGC
TGCCCCACAC CCAAGATAGT AAAAAACGGT GAAGGTGCAG CCCTCATGAG AAAACCTGAA
CTAGCGCAAA AAATAATAAG CGATGTTGTG CAATCTGTAC GAGTACCCGT AACCGTTAAA
ATTAGGAAAG GGTGGGATGA ATCCTTTCCT AACGCCGTGG AAATGGCGCT TTTGGCCGAA
GAGGCGGGAG CAAAGGCGGT TACAGTACAC GGCCGAACCA GATCGCAATT TTACAGCGGC
AAAGCTGACT GGGATATTAT TAAAAGTGTT AAAAAGGCAG TAACTATACC AGTTATAGGC
AACGGTGACA TTCGAGAACC GCGAGACGCC GTTCGTATGC TTATGCATAC CGGTTGTGAT
GCAGTCATGA TAGGACGTGC ATCTTTGGGT AACCCATGGA TATTTTCTTC CACCGTTCAT
TTTTTGGACT GCGGGGAGAA TTTGCCGGCA CCTTCTCCCC GCCAAAGGTT ATCTGTAGCA
TTGCGCCACT TGGAACTGCT GATAGAGCTA AAAGGTGAAT ACATTGCCAT ACGTGAAATG
CGTAAACATG CAGCCTGGTA TACCAGAGGG CTGCGGGAAG CTAACCGTAT AAGAGAAAAA
ATTAACCGCG CAGTTTCTTT GAGCGAAATT AGAGAACTTC TGAATTATTT TATACTAGTT
AAAAATTGA
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| Protein sequence | MLRIGNVTIK NRVISAPMAG ITDRAYRILA KEAGCGLVCT EMISDQALLY GNPKTNILLD
CTGETPPISM QIFGSSPEYM ARAASITEAR GASIIDINMG CPTPKIVKNG EGAALMRKPE
LAQKIISDVV QSVRVPVTVK IRKGWDESFP NAVEMALLAE EAGAKAVTVH GRTRSQFYSG
KADWDIIKSV KKAVTIPVIG NGDIREPRDA VRMLMHTGCD AVMIGRASLG NPWIFSSTVH
FLDCGENLPA PSPRQRLSVA LRHLELLIEL KGEYIAIREM RKHAAWYTRG LREANRIREK
INRAVSLSEI RELLNYFILV KN
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