Gene Dtox_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0101 
Symbol 
ID8427024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp109875 
End bp110951 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content43% 
IMG OID645032497 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_003189687 
Protein GI258513465 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.307739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000342072 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGTTATTGT CGGCGTCTCA GGATATAAAA ACATTGCATT TGCTTGATAA CTGTTACCCT 
AAAAGGAGTT TTTCCATGCA CATGTTTTCC CAAATAATAG GGCACAAAAG TTTGATTAGA
GGACTGGAAC AAGCTGTAGC AACAGGAAGG GTGGCCCATG CTTATCTCTT TTCCGGACAG
CATGGAGTAG GTAAAAAAAC TACCGCACTC GCTTTGTCAG CCTCACTTCT TTGTGATTTT
AACCGGAGTG GGGATGCTTG CGGCAAATGT ACAAGTTGCC GTCAACTGGT GAATGGCAAC
CACCCTGATC TGCATATTAT ATCTCCTGAC GGAGCCAGTA TAAAAATTGA ACAGATCAGA
GACTTGCAGC AGAAAGCCAG GTACAAGTCC TATCAAAATA AGCACCAGAT TTTTATAATT
GACCAGGCGG AAGGAATGAC CAGAGAAGCT GCTAACTGCT TCCTGAAGAT TTTGGAGGAA
CCGCCGGAGC AAACTGTATT TATCTTGATT TCAGCTGAGC CGGAATTGCT GCTGCCGACG
GTAATTTCCA GATGTCAGCC GATGTCTTTT AAAGATCTTG GTTTGGAGGA GATTTCCTCA
TTGCTCATCC AATTATCCGG TGTTAATCAG GAAAAAGCCG GTTTAGCTGC GCAGATGGCA
CGAGGCAGTA TTGGCAGAGC TTTAAGCTAC TTTAATGACG ATCAACAATA TAAACTAAGA
GAGCTGGTTA TACGCTTGTC CCAAAGTACC AGGCGCTCGG CCATTTCTTT GTTGTTACAA
GAAGTTGAAG AGCTTTTGGG TAAAAAAGTA AATATCTTTG AAATGTTGGA AATGCTTTCA
TTATGGTATC GGGATTTATT AATTTGGAAG TCCTCACATA ACGAAAAGCT CGTTTTTAAC
CGGGACAAGC TGGATGTAAT AGATACGGAA GCAGAGCATT ATACTTTGGA AAAACTGGTA
AACGCTTTGG AAATGTCTGA GATGACCAAA TATAAATTAA TGCGCAACGC TAACCGGCGT
GCGGCACTGG ATGTGCTGCT GCTGAGTTTG ACCCGTTTAG GAAGAGGGGA GCACTGA
 
Protein sequence
MLLSASQDIK TLHLLDNCYP KRSFSMHMFS QIIGHKSLIR GLEQAVATGR VAHAYLFSGQ 
HGVGKKTTAL ALSASLLCDF NRSGDACGKC TSCRQLVNGN HPDLHIISPD GASIKIEQIR
DLQQKARYKS YQNKHQIFII DQAEGMTREA ANCFLKILEE PPEQTVFILI SAEPELLLPT
VISRCQPMSF KDLGLEEISS LLIQLSGVNQ EKAGLAAQMA RGSIGRALSY FNDDQQYKLR
ELVIRLSQST RRSAISLLLQ EVEELLGKKV NIFEMLEMLS LWYRDLLIWK SSHNEKLVFN
RDKLDVIDTE AEHYTLEKLV NALEMSEMTK YKLMRNANRR AALDVLLLSL TRLGRGEH