Gene Aaci_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_3005 
Symbol 
ID8417515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013206 
Strand- 
Start bp46544 
End bp47719 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID645029131 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_003186397 
Protein GI257792998 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0494623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA CCTTTCGCCA TGGAGATCTC GAGAAAATTC TGCGCCAGCT GCTTCGCGTG 
GTGCCGAATT CGACGAACAA GGCCGTCCTC AAGCACGTGC TGATTGAGGC CAAGCGAGAG 
GAAGATCGCG TGGATTTCTA CGCTTCCAGC GAGGACATGT CCCTTCGACG CACGCTCTGC 
GTCGAAGCGA CGGACTCGAG CGTAGAGATT GCGCGGTCTG GTTCGTGTTT GCTCCCAGCG 
AAGGAGCTGT ACGAGGTAAT CAAACGGGCT AATGGCCCTA TCACAGTAGA GACCACTACA 
GACCGCACGG TCATCACGTT TGGCAAGACC AAGTTCGAGC TTGTGGGTTT GCAGCCACGT 
CTCTTTCAGC CTTACGGTGA TGCAGATGAC GAGGTGACCA CCGCCACGGT GCTCGCACCG 
CATCTGTATC GACTGATTCG ACGAACGAGC TACGCTGCAG GCAAAAGTCA GACACGACCC 
ATTCTCACGG GCGTGCAGCT TACCTTGGCG GACGGACATC TGTCGGCGGT GGCGACCGAC 
GCGCTTCGCT TGGCGCAATA CACCGTGTCT TGCGAAGACG TGAACGGCGA GGACCGACAG 
CTGGTGATCC CAGCGGTCTT GCTCGACACA CTGGCCACGG CGTTGCCCGC ATCGGATGAC 
GATGAAGAAG TCACCTTCAC CCTTGGCACC TCGTCATGCA CGGTGTCGTG GGGAGATGAT 
GCCTTTCACA TGGCGCTTCG AGGCTTGGAA GGCACGTATC CAGATACCGC GCGACTGATT 
CCAGAGCGCA CAGCCCATCG CGTGGTGGTC GAGCGCCAGG CGCTTCTTAC GGCTTGTGAA 
CGTGTGGCGA TTCTGTCCGA AGCGGACCAT CAGCGAGCCG AGTTTCGGTT TACGATGTCC 
GGCCTCACTG TGTCCGCCAC GTCGACGCAA TACGGTCACG CCGAGGAAAC CCTGGAGACG 
ATCCAAGGCA CGAAGGACGA TGTGGAGCTC CTGTGCAACG TGCACTATTG GATCGCGGCG 
CTCAAGGCGT TAGACGGGAT CGCACAGGTT GAAATCGGGC TCAACGGGCC GTTACAGCCG 
TGTCTTCTGC GTCCTGTCGG TGAAGAAGGG GTAGGCCTTA TCGCAACAGT GGCCCGCTCC 
TCGGCGCCTA CGGAAACCAA GCGCCAAGCT AGCTAA
 
Protein sequence
MKATFRHGDL EKILRQLLRV VPNSTNKAVL KHVLIEAKRE EDRVDFYASS EDMSLRRTLC 
VEATDSSVEI ARSGSCLLPA KELYEVIKRA NGPITVETTT DRTVITFGKT KFELVGLQPR 
LFQPYGDADD EVTTATVLAP HLYRLIRRTS YAAGKSQTRP ILTGVQLTLA DGHLSAVATD 
ALRLAQYTVS CEDVNGEDRQ LVIPAVLLDT LATALPASDD DEEVTFTLGT SSCTVSWGDD 
AFHMALRGLE GTYPDTARLI PERTAHRVVV ERQALLTACE RVAILSEADH QRAEFRFTMS 
GLTVSATSTQ YGHAEETLET IQGTKDDVEL LCNVHYWIAA LKALDGIAQV EIGLNGPLQP 
CLLRPVGEEG VGLIATVARS SAPTETKRQA S