| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2830 |
|---|
| Symbol | |
|---|
| ID | 8426371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2890051 |
|---|
| End bp | 2891058 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645028957 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003186223 |
|---|
| Protein GI | 258512789 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0473257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAAGC GGGCCACCAT CCAGGACGTC GCGCGAGCGG CCGGGGTGTC GGTCACCACG
GTGTCGCGGT ACTTGAACGG GCGCTACGAG TCCATGAGCG AGAATACGCG AGAGAAGATT
GCCGCGGTCA TCGCGGAACT CGGCTATCGG CCCAACGCGC TCGCCAAGGG GCTGAAGGCG
CAGCGGACGG AGACCGTGGG CGCGATTGTG GTCAACATGA GCTATCCGTT TTGCGTCGGC
TTTCTCCGCG CGTTCTCGCG GACGCTCAGC GCTGCCGGGT ACCACCTCAT GGTGGCCGAG
TCCGAGGGCG ACGCAAAACG GGAGCGACAG CTCATCGAGT CGTTTGTTGC CAACCGCGTG
GAGGCCATCG CGCTGCAGAC GAGTGGAGCC AACAACGACT ACCTGGAGGA TTTGGCGCGC
GAGATGCCGG TGGTGTTGGT CGATCGCGCC TTCGCCCTGC GGAACGCGTA CGCCATCGGC
ACCAACAACC GCGACGCTTC GCGCGAGATC GCGTGGCAGC TGTTCGACCT CGGCTACGAC
TGCGTGGTCT ATCTGACGGA GGACGAGCGC GGGATCCCCA CGCGGACGGA TCGCCTGGAA
GGGTATCTGG ACGCATGCCG CGTGGCGCTC CGGGAGCCCG TGGTGATGCG CGTGCGGCGC
GGCGATCCGG CTTCCTTCCG CGAAGCGCTC GCCCGTGTGG ACGCCTGTGC GCGCAAGGAG
CGCACCGCCG TGTACACCGC GAATGGCCTC GTGCTGATGG AATGCTATCG GCCGCTCCGG
GCGCTCGGCC ACAAGGTGCC GGATGCCATG GGCATTGCCA CCTTCGACCA GCCGGACTGG
GCCGATCTCG TCGATCCGCC CTTGACCTGC GTCCGTCAGC CCGTGGAGGA GATGGGCGAA
GCGGCAGGGC GGATCATCAC CGCCCGCCTG CGGGGGGAAG CGGTAGCTGC GGAGGTCCTC
GTTGTGCCGT CCACCGTCGT GATGAGGGGG TCGACGGGGC GGGGATAA
|
|---|
| Protein sequence | MPKRATIQDV ARAAGVSVTT VSRYLNGRYE SMSENTREKI AAVIAELGYR PNALAKGLKA
QRTETVGAIV VNMSYPFCVG FLRAFSRTLS AAGYHLMVAE SEGDAKRERQ LIESFVANRV
EAIALQTSGA NNDYLEDLAR EMPVVLVDRA FALRNAYAIG TNNRDASREI AWQLFDLGYD
CVVYLTEDER GIPTRTDRLE GYLDACRVAL REPVVMRVRR GDPASFREAL ARVDACARKE
RTAVYTANGL VLMECYRPLR ALGHKVPDAM GIATFDQPDW ADLVDPPLTC VRQPVEEMGE
AAGRIITARL RGEAVAAEVL VVPSTVVMRG STGRG
|
|---|
| |