| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2457 |
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| Symbol | |
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| ID | 8425986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2523950 |
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| End bp | 2525476 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645028575 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003185852 |
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| Protein GI | 258512418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.140372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACAGGT GGAAACGTGG TCTGTCGGCA GGCGCAAGCC TCGCGCTGGT CGCGGCAGCC
GCCACCGGTT GGACCGTTCA CGCGCGCTTC GCGCACGCCG ACAACGTGGT CGATCTCGTC
GCGCAGACGG GCGATCTCGA CGCTTCTCTC GCCCAGGTCC TGCACGGCGC GCCGTTTGCC
ATGCCCATCC CGTCGTTGCC GGACATCGTG CCCCGCGTCT ACGACATCAC CGAGTACGGC
GCGAAGCCGG GCATCGGCCA GGTGAACACA CAGGCCATTC AGGCGGCCAT CGACGCGGCA
AGCCAACACG GCGGTGGCAT CGTCGACATT CCGCCGGGGT ATTGGGTCAC CGGTCCCATC
GTGCTCAAGA GCCACGTCGA TCTGAACGTG GAGTCCGGCG CCCAACTCCA GTTTTCGGGC
GATCACGACC TGTATCCGCT CGTTCCGAGC GGGAATTCCT ACATCGTTCA ATCGCCCATC
AGCGCGACAA ACGCGGTGGA TGTCGCCATC ACGGGTCACG GCGTCATCGA CGGCGCCGGC
AATACGTGGC GGCCCGTGGA GAAGTCGAAG CTTTCGGCGG ATCAGTGGAA TGCGCTCGTG
GCGTCGGGTG GCGTGGTGTC GCCGGACGGC AGCACCTGGT GGCCGACGGC GCAGGGTGCG
AACGCCCAGG CGTATATCAA GGCGCATCCG AACATGACGT ATCAGGACGA CTTGCAGGTG
AAGGACTACC TGCGGCCGTA CATGGTGTAC TTCCAGGGAT GTCAACGCGT GTGGCTCCAG
GGCGTGACGT TTGAAAATTC GCCGTTTGCG ACCGTGAAGG TGAACACCTC CAAGGACGTC
GTCATCGACG ACGTCAACAT CCGCAACCCG TGGTACGGGC AGAACACGGA CGGAATCGAC
GTGTCGGCCG ATGAGAATGT CGTCTTGTAT CGCGACGTGA TCGACACGGG CGACGACGGC
ATCGCATTGG AGTCGAGCGG GAACGACGCG GCGGGGGTGT TCAACGAGCA GGACGTCGTC
GTGGCGGACT GCATCGTGCA CAACGGCCAC AGCGGTTTCG CCGTCGGCAG TTACACAGAC
GGCGGCATCC GGGACGTGTG GGTGACGGGT GACGTGTACG ACGGCACGGA GTCGGGCCTG
CGCTTCAAGA GCGGCGTGGG CAAGGGCGGA CTGGTGGAGG ACATCGACAT GGACCACATC
GTCATGCGGG ACATCAGTGG AGCCGCCATC ACCTTCGACG ACGGGTACGT GGACAACGGA
GCGGACACAT CATCGCTTCA AGCGCCCGGG CCAAACTCGT ACGTGCCGCA GTTTGAGAAC
ATGACCATCT CGAACGTGAG TTGCGAGTAC GCGGGCCAGT CCATCTACAT GAACGGCCTG
CCGAACGCCC CTATCTCGAA CATCATGCTG GACGACGTCA ACATCACGGC CAATAAGCCG
CCGCAGATTC AGAACACCTC GAACCTTGTG GAGAATCAGG TGCAGATCCA GTCGGGCGTG
ACCATGCTCG GCGAGATTCC GCACTGA
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| Protein sequence | MHRWKRGLSA GASLALVAAA ATGWTVHARF AHADNVVDLV AQTGDLDASL AQVLHGAPFA
MPIPSLPDIV PRVYDITEYG AKPGIGQVNT QAIQAAIDAA SQHGGGIVDI PPGYWVTGPI
VLKSHVDLNV ESGAQLQFSG DHDLYPLVPS GNSYIVQSPI SATNAVDVAI TGHGVIDGAG
NTWRPVEKSK LSADQWNALV ASGGVVSPDG STWWPTAQGA NAQAYIKAHP NMTYQDDLQV
KDYLRPYMVY FQGCQRVWLQ GVTFENSPFA TVKVNTSKDV VIDDVNIRNP WYGQNTDGID
VSADENVVLY RDVIDTGDDG IALESSGNDA AGVFNEQDVV VADCIVHNGH SGFAVGSYTD
GGIRDVWVTG DVYDGTESGL RFKSGVGKGG LVEDIDMDHI VMRDISGAAI TFDDGYVDNG
ADTSSLQAPG PNSYVPQFEN MTISNVSCEY AGQSIYMNGL PNAPISNIML DDVNITANKP
PQIQNTSNLV ENQVQIQSGV TMLGEIPH
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