| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2442 |
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| Symbol | |
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| ID | 8425971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2505376 |
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| End bp | 2506251 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645028560 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_003185837 |
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| Protein GI | 258512403 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.337802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCTG TGCCAGTCGA ACTCCGGGGC GATTTCGAGG TCTGCCGCCG ACTCACGCGG
AGCCACTACG AGAACTTCTC GGTGGTGTCG CTGTTCGTGC CGCGCCATCT TCGTCCGCAC
TTTTATTCGG TTTATGCTTT TTGTCGCGGC GTGGACGATC TCGGCGACGA ATTCGCGGGA
GACCGCATGG CCGCCCTCGA CGCCTACGAG GAGGAACTGC GGCGCGCGTT CGCGGGCGAG
GCCACCACGC CCGCCTTCCG CGCCCTTCAG TTCACCATCG CCACCTGTAA CCTGCCCATG
GAGCCGTTTC TCCGGCTCAT CGAGGCCAAT CGGCGCGATC AGCGCAAGCA CACGTACGAC
ACCTGGGAGG ACCTTCGCGA CTACTGCCGC TATTCGGCCG ATCCCGTCGG TCGGCTCGTG
CTCGGCATCT TCGGCTGCCT GGACGACGAG CGCGCGCGCC TGTCCGACGC CACGTGCACG
GCGCTGCAGG TGGCCAATCA CATGCAGGAC ATCGACCGCG ATCTCGCCCT CGGCCGCATC
TACGTCCCGC GCGCGGATCT CGAGCAGTTC GGCGCGACGC TGGACGACAT TCGCGCCCGG
CGAGCGACGG ACGGCGTGCG CCGGTGCATC GCGCTCGAGG TGGATCGCGC CCAGGCGCTG
TTTGACGAGG GCCGCAGGCT CGAATCCCTC GTGCCGCCGC GCCTGGCTCG GCAGCTGAAG
CTCTACCGCC TCGGCGGCGA AGCGATTCTC GCGGCCATTC GCCGCCAGGG CTACAACCCG
TTTGCCGGCA GACCCGTGGT CTCGGGCAAG CAAAAGCTCC GCATCGCGCT CTCGGTGCTC
GCCGGCGGCG CGAAAGGCGA AGGAGGGTCG GCATGA
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| Protein sequence | MGSVPVELRG DFEVCRRLTR SHYENFSVVS LFVPRHLRPH FYSVYAFCRG VDDLGDEFAG
DRMAALDAYE EELRRAFAGE ATTPAFRALQ FTIATCNLPM EPFLRLIEAN RRDQRKHTYD
TWEDLRDYCR YSADPVGRLV LGIFGCLDDE RARLSDATCT ALQVANHMQD IDRDLALGRI
YVPRADLEQF GATLDDIRAR RATDGVRRCI ALEVDRAQAL FDEGRRLESL VPPRLARQLK
LYRLGGEAIL AAIRRQGYNP FAGRPVVSGK QKLRIALSVL AGGAKGEGGS A
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