| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2237 |
|---|
| Symbol | |
|---|
| ID | 8425765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2295955 |
|---|
| End bp | 2297355 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645028357 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003185635 |
|---|
| Protein GI | 258512201 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCA AGGTCAAGCG TTGGACAAGC GTCGCGCTCG CGAGCTCGGC AGCCGCGGCA
CTGGTCGTTG GATGCGGCCA GCCAAACAAC ACGGCGTCCC AGACCAGCAC GAACGGAAGC
GCATCCACTG CGGCGTCGTC CGCCAGCACG GTGAGCGTGG CCGGGGTGCG GATCGCGAAG
CCGACCCACC TTGTGAACTA CAAGAACGCC TCGGGAACGA TTGTCTGGGC GGAATCGTTT
ACCACTGGCC CCACCGCCAG CGAGTTGGTC TCGGCGTTTG AAAAGAAATA CCCCAAGATC
AAAGTGAAGT TGCAGGTTCA GCCCTCGAAC ACCGACACCA ACCGCGCCGA CCTGACGGCG
TCCATCAGCG GCGGATCTTC CACGCCGGAC GTCTACATGG GCGACGTGAT CTGGCCTGCT
CAGTTTGCCC ACAATCAGTT GGCGGCGCCT CTCTCGGATG ATCTGCCCAC GTCCTTCTGG
ACGCGCTTTT CGAACGGCTT GGTGGCAGGA GCCACGTATA ACGGAAAGGT CTACGCGGCG
CCGCTGTTTG CCGATACAGC ATTCCTTTAT TACCGCAAGG ACCTGTTGGC CAAGTATCAT
CTGCCCGTGC CGAAGACGTG GCAGCAACTG CAAACGGAGG CTTCTTACAT CGTCAAGCAC
GGTGGAGCGA AGTATGGGTT CGTCTGGCAG GGCGCTGATT ACGAGGGGCT CACCTGCGAC
TTCGACGAGT ACCTGGCGGA TGCAGGCGGC AGCGTGCTGA CGAACGGCAA AGCTACACTG
AACACAGCGG CTGCGAAACA GGCACTCTCG TTCATGCGAG GGCTCATCAC GTCCGGTGCC
ACGCCCCAAT CGGTGGACAC GTTCCAGGAG CCCCAGTCTG AGAATGTGTT CACGCAAGGG
AATGCCGTGT TCCTGCGCAA CTGGTCCTAC GCGTGGTCGG ATTCCCAGAA TCCGCAAAGT
TCGAAGGTCG TGGGCAAGGT CGGCGTAGCG CCTCTTCCGA CATTTGCTGG ACACGGCTCG
AGCGGCTACA GCACGGTCGG TGGCTGGGAC CTGTACCTCA ACCCGCACAC GAAGAATCTG
GCAGCCGCCC TTCAGTTCAT TGACTGGATG ACGAGCCCGC AGGCTCAGGA AATTCTGGCG
GCCAACTCGG AGATGCCCAC CATCAAGGCT GTGGCGGACA GCCCGTCGCT CGCCAAGTAC
AGCCCGGTGT TCGCCCTGTT GCCACAGGTG AAGTTCGTCT CGCGGCCGGC GCAGACACCG
AACTATCCGG CGGTCTCCAA GGCCATTTAC GACAACGTCA ACGCGGCGCT GGCTGGCAGT
GTGTCTGTAG CGCAGGCGCT GAAGAACGCG AACCAGCAAA TTCAGCAGGC TCTGAGCGGC
AGCGGTTCGG GCGGTCTCTG A
|
|---|
| Protein sequence | MKSKVKRWTS VALASSAAAA LVVGCGQPNN TASQTSTNGS ASTAASSAST VSVAGVRIAK
PTHLVNYKNA SGTIVWAESF TTGPTASELV SAFEKKYPKI KVKLQVQPSN TDTNRADLTA
SISGGSSTPD VYMGDVIWPA QFAHNQLAAP LSDDLPTSFW TRFSNGLVAG ATYNGKVYAA
PLFADTAFLY YRKDLLAKYH LPVPKTWQQL QTEASYIVKH GGAKYGFVWQ GADYEGLTCD
FDEYLADAGG SVLTNGKATL NTAAAKQALS FMRGLITSGA TPQSVDTFQE PQSENVFTQG
NAVFLRNWSY AWSDSQNPQS SKVVGKVGVA PLPTFAGHGS SGYSTVGGWD LYLNPHTKNL
AAALQFIDWM TSPQAQEILA ANSEMPTIKA VADSPSLAKY SPVFALLPQV KFVSRPAQTP
NYPAVSKAIY DNVNAALAGS VSVAQALKNA NQQIQQALSG SGSGGL
|
|---|
| |