Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2206 |
Symbol | |
ID | 8425730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2268089 |
End bp | 2268871 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645028322 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003185604 |
Protein GI | 258512170 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0313924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCCTAG GGTGCTGCGT TGGGCCTCGA GAGTTGCGCT TTGTCCGCGA CGCCGGGTTT GACTACGCCG AGTTGAACGC GAAGGTGACC AAACCGAGCA TGCCGGATGC AGAATGGCGG GCGATTCGCG ACGAACTGCT GCGAAATCAG GTGCCGCTGC TCGCGTTCAA TCGTCTGTTT CCGCCGGACA TGTCGATCGT GGGCCCGGAC GTGGACATGG ACGAGATCGC GCGGTACCTG GCCGTTGCCT TTGCGCGAAT GGCCGATCTC GGCGGTCAAC ACGTCGGCTT CGGGGCAGGC AAGAATCGCC GCGTGCCGGA CGGTTTTCCG CGGGACGAGG CGCGCGCGCA ACTGGCCCGC GTGGTGCGGA TGGCGGGCGA TCTCGCCGCC GCGCACGGGA TGTGGGTCCA CTTCGAGTTT TTCAATCGCG CGGAGACGAA TCTCATCAAC ACGGTGGAAG ACGCGGTGTC GTTTGTGCAA GAGCTTGCTC ACGATCGCGT CGACCTGCTC GTCGATTTCT ATCACCTCGT GCAAAATGGC GAGCCCGTGA GCGAGCTGAC AAAGGCAGGG GGCCGCATTG GTTACGTGCA CGTGGCGGAC GAAGAGCGGA AATGGCCGGG CAGCGGCTCG CTCCCCGTCC GAGAATGGTT TGAGGTGCTC CGGGAGATCG GCTATCAGGG CCCCATCTCC ATCGAGTGCA ATTTCGAAGA TCCCATCCCC GAACTGAGGC AAGCCGGGGA AGCCATTCGC AGGCTCAGTT ATTCGGGCGG CTCAGGGCGA TAG
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Protein sequence | MLLGCCVGPR ELRFVRDAGF DYAELNAKVT KPSMPDAEWR AIRDELLRNQ VPLLAFNRLF PPDMSIVGPD VDMDEIARYL AVAFARMADL GGQHVGFGAG KNRRVPDGFP RDEARAQLAR VVRMAGDLAA AHGMWVHFEF FNRAETNLIN TVEDAVSFVQ ELAHDRVDLL VDFYHLVQNG EPVSELTKAG GRIGYVHVAD EERKWPGSGS LPVREWFEVL REIGYQGPIS IECNFEDPIP ELRQAGEAIR RLSYSGGSGR
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