Gene Aaci_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2101 
Symbol 
ID8425623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2157982 
End bp2158908 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID645028216 
Productprotein-export membrane protein SecF 
Protein accessionYP_003185500 
Protein GI258512066 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.116132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCCAA GGTTTGATAT CATCCGGGCG AGTCGCTGGT TCTTTTTGCT GTCCGGGGCC 
ATCACGGTGG CCGGCGTGAT CGTCTTCGCC CTTTTCGGCT TCAACCTGAG CACGGATTTC 
AAATCGGGAT CCGAGGTCCA GTTTGAGCTC AATCAGCGGG TGCCCGAGGC TCGGGTGCGC 
CAGATGTTTG CATCCATTGG GCTGCCGCTT GGCGACACGA GCCTGACGGT GGGCGGCATT 
CAGCAGAATG TCGTGATGGT CACGTTGCCC GAGCAGCTCA CGGCGAAGCA GATCAGCGAG 
ATTCAAGCTG CGGAACACCG GTTTTTCCCT GACGCGAAGC AGGATATTCA GGTCAACTCG 
GTCGATCCGT TTGTCGCAGA ACAGACGGCT CGCAAAGCGG TGTACGCCGT GCTCGCCGCG 
GCTGCGTGCA TCGTCGTGTA CATCGCCATT CGCTTTGAGT TCCGCTTCGC CATCTCGGGG 
ATCATTGCGC TCCTTCACGA CGCGTTCATC GTGCTTGCGG CGTTTGCCCT GCTTCGACGC 
GAGGTGGATT TGACCTTTGT GGCTGCGCTT CTGACGATTG TGGGATACTC CATTAACGAT 
ACGATCGTCA TCTTCGACCG TATTCGCGAG AACCTGAAGA TCGACAAACC GGAAACGGTC 
GACGAACTGC GGGCGGTCGT CAACAAGAGC CTCTGGCAGG TGATGAACCG ATCCATACGC 
ACGGTTCTCA CGGTGCTCAT CGCGGCCGTC ATCCTCTATT TCTTTGGCGG CATCTCCATC 
CGCAACTTCA CGTTTGCGCT CATCATCGGG CTGGTGAGCG GGGCGTATTC GTCCATCTTC 
ATCGCGAGCC CCATATGGGT GGCGTGGCGA TCTCGCTCGA TGAAGAAGGC CACTCGCGGC 
GACAAAGCCG CACCGATTCC GGAGTGA
 
Protein sequence
MKPRFDIIRA SRWFFLLSGA ITVAGVIVFA LFGFNLSTDF KSGSEVQFEL NQRVPEARVR 
QMFASIGLPL GDTSLTVGGI QQNVVMVTLP EQLTAKQISE IQAAEHRFFP DAKQDIQVNS 
VDPFVAEQTA RKAVYAVLAA AACIVVYIAI RFEFRFAISG IIALLHDAFI VLAAFALLRR 
EVDLTFVAAL LTIVGYSIND TIVIFDRIRE NLKIDKPETV DELRAVVNKS LWQVMNRSIR 
TVLTVLIAAV ILYFFGGISI RNFTFALIIG LVSGAYSSIF IASPIWVAWR SRSMKKATRG 
DKAAPIPE