Gene Aaci_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1673 
Symbol 
ID8425183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1744306 
End bp1745397 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content66% 
IMG OID645027778 
Product3-dehydroquinate synthase 
Protein accessionYP_003185074 
Protein GI258511640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.333487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGAC TGGAGGTGCA AAGCTCTCAA GGCGCGTATC CCGTCCTCGT CGACGCAGGC 
GCTAGGCGCT TTGTGCCCGG GCTGCTGCAG GAGCTCGGGC TTGCGGGCCG TAAGATCGCG 
CTCATCACGG ACGAAATCGT CCAAAGGACG GCGTTTACCG AGGAACTCGC GGGTGCGGTT 
CGGGAGGTGG GGCGCGAGGT CTTTGTGCTC GCGTTTCCCG CCGGTGATGC GCACAAGAGC 
CTCGCCACCG CGGTCGAACT GTACCACGGG CTGCTTCGGC GCGGCTTTCG CCGAGGTGAC 
GTCATCTTGG CCGTCGGCGG CGGCGTGGTG GGCGACCTGG CCGGGTTCGT GGCGGCGACG 
TATATGCGGG GCGTTCCGTA CGTGCAGGTG CCGACCACGT TGCTCGCGCA CGACAGCGCC 
ATCGGAGGCA AGGTGGGCGT CAATCTCGAG GAGGGCAAAA ACCTCGTCGG CGCGTTCTAT 
CCCCCGCGTG CGGTGTTGTT TGACACCGAG GCGCTCTGCA CGCTCGATGC GCGTCAGTGG 
AGCAACGGGA TGGCCGAGGT CATCAAGCAC GCCATCATCG CGGACGAAAT CTTGTTTGAA 
CAGCTTGAAG CGAATCCCTT GACGGGCCTC GGCGATCCGG CTGCGTTTGT GGACATCGTC 
GCCCGAGCCA TGCGCGTCAA GGTGGACGTG GTGAACCGGG ACGAACGGGA GACTGGGCTC 
AGGCAGGTGC TCAACGTCGG TCACACCGTG GGGCACGCGG TCGAGCAGTA TTCGGGGTAT 
ACCCTGGGTC ACGGTGAGGC CGTGGCCATC GGGCTCGTTG TCGAGGCCGT TATCGCCGCG 
AGGCGCGGCC TCCTGTCTCC GGCCGACGCC GTGCGGATCG CGGCTGTGCT CGAGCGGCAC 
GGCTTGCCCA TTCGTCCGCC CTACGCGGAC GTGGAGGCCG TGCTCCGCCT GATGGCGGTC 
GACAAAAAGC ACACGCACGA GGGGTGGACG TTCGCACTGC CCACCGCCAT TGGCCGGGTG 
GAGATCTGCA AGGTTCAGCC CGACGAGGTG AGACAGGCAT ACGAAGAGGT GAGGGAGGGA 
CACCGTCCAT GA
 
Protein sequence
MIRLEVQSSQ GAYPVLVDAG ARRFVPGLLQ ELGLAGRKIA LITDEIVQRT AFTEELAGAV 
REVGREVFVL AFPAGDAHKS LATAVELYHG LLRRGFRRGD VILAVGGGVV GDLAGFVAAT 
YMRGVPYVQV PTTLLAHDSA IGGKVGVNLE EGKNLVGAFY PPRAVLFDTE ALCTLDARQW 
SNGMAEVIKH AIIADEILFE QLEANPLTGL GDPAAFVDIV ARAMRVKVDV VNRDERETGL 
RQVLNVGHTV GHAVEQYSGY TLGHGEAVAI GLVVEAVIAA RRGLLSPADA VRIAAVLERH 
GLPIRPPYAD VEAVLRLMAV DKKHTHEGWT FALPTAIGRV EICKVQPDEV RQAYEEVREG 
HRP