| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1408 |
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| Symbol | |
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| ID | 8424915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 1457754 |
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| End bp | 1458530 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645027524 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_003184824 |
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| Protein GI | 258511390 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAACG ACGTTCTCGA GCATTTCAAC CTGTTTTTGC TCATGGCCGC GAGAACCAGC
GGGTTCATCC TCGCCGCGCC CATCTTGTCC AGCGCCTATT GGCCGAATCT CGCCAAAGTG
GCGCTTGCCC TGGCGCTGGC CTCATTCGCG GTGCCTTCGG TCCATGCTTC GGTTCCCGAC
ATTGCGACCC AGCCGGGGCC GTTTGTTGTC GACTTCGCGC TCGAGGCGGT CGTCGGGGTG
GTGTTGGGTT TTGTGGCCAC GTGGATCTTC AACACCATGA ACATCGCGGG CCAACTGGTC
GATCTCCAGA TCGGGATGGC GGTCGCCGAT CTCGCCATGC CGGGATTCGG GCAGCAGGCG
GGCGTGTTCA GCAGCGTGTA CAACGTGTGG TTTTCGCTGT TGTTCATCGG CATGGGGGGG
CTTGGCGGGC TGTCGAGCGC CGTCCTCGAG TCCTTTCGGC TCATCCCCAT CGCCGATTGG
CACCTGCCCA CTGACTGGAT CGCGCTCTGT GCACAGACCA TGGGCACCGT CATGCTCATG
GGCGTCGATG TGGCCCTGCC CGTCTTCGCA AGCCTGTTTC TGTGCGACGT CACGTTCGCG
CTCCTCGCGC GCGCCGTGCC GCAGATGAAC GCCTTCGTGG TCGAGTTGCC CGCGAAACTC
TTCGTCGGGC TCGCTTCGTT CGCCGTCGCC CTGCCGGTGA CGGTGGGCTT GTTCCGTCAG
CTGTTGAACC TCGTGTTTCT CAACCTGCAA AGTGTCATGC GCCTAGTCGG AGGGTGA
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| Protein sequence | MVNDVLEHFN LFLLMAARTS GFILAAPILS SAYWPNLAKV ALALALASFA VPSVHASVPD
IATQPGPFVV DFALEAVVGV VLGFVATWIF NTMNIAGQLV DLQIGMAVAD LAMPGFGQQA
GVFSSVYNVW FSLLFIGMGG LGGLSSAVLE SFRLIPIADW HLPTDWIALC AQTMGTVMLM
GVDVALPVFA SLFLCDVTFA LLARAVPQMN AFVVELPAKL FVGLASFAVA LPVTVGLFRQ
LLNLVFLNLQ SVMRLVGG
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