Gene Aaci_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1368 
Symbol 
ID8424875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1424492 
End bp1425142 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID645027484 
ProductRibonuclease H 
Protein accessionYP_003184784 
Protein GI258511350 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGGT GGATGAGGCG TTATCGACTG GATCTGGCGC TTAGCGGTGG TTGTCGAACG 
GCCGGCGTCG ACGAGGTCGG TCGGGGGTGC ATTGCCGGTC CAGTTGTCGC GGCGAGTGTC 
GTTCTTCCGT TGGAACGGGA GACGTATGAG GAATTGAAAG ATGTCATGGA TTCCAAGCAA 
CTGAAGCCGG ACGTGCGGGA GCGCCTGGCG GATCGCATTC GAGCGAAGGC TCTCGCCGTC 
GGCATCGGGA TGGCGAGCCC TGAAGAAATC GACCGGTTGA ACATCCTGCA GGCGACCCAG 
CTTGCCATGA AGCGGTCACT CGATGCCCTG GACATTCCCG TCGATCTGGC GCTGGTGGAC 
GGGAACCGCG GGTTTCGGCA TCGCGTCCCC GTGTTGCCGG TGGTGGACGG AGACGCGCGA 
TCGTTGCTCG TCGCTGCGGC GTCCGTGATC GCCAAGGTTT TCCGCGATCG GCTCATGGCG 
AAGCTGGATG AGGGTTTTCC GGGATACGGT TTTTCAGAGC ACGTGGGGTA CGGCACGCGC 
GCTCATTTGG AAGCGCTGCG GCGCCTTGGG CCCTCGGTGG TACATCGACT TTCGTTCGCC 
CCCGTGCGCG CGTGCGTGGG CGAGAAGGAG CAGATGAGCT ATGGATCCTA G
 
Protein sequence
MDGWMRRYRL DLALSGGCRT AGVDEVGRGC IAGPVVAASV VLPLERETYE ELKDVMDSKQ 
LKPDVRERLA DRIRAKALAV GIGMASPEEI DRLNILQATQ LAMKRSLDAL DIPVDLALVD 
GNRGFRHRVP VLPVVDGDAR SLLVAAASVI AKVFRDRLMA KLDEGFPGYG FSEHVGYGTR 
AHLEALRRLG PSVVHRLSFA PVRACVGEKE QMSYGS